Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Mrpl47Q8K2Y7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl47Q8K2Y7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl47Q8K2Y7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.79■□□□□ 0.6
Mrpl47Q8K2Y7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Mrpl47Q8K2Y7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl47Q8K2Y7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl47Q8K2Y7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Mrpl47Q8K2Y7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mrpl47Q8K2Y7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Mrpl47Q8K2Y7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Mrpl47Q8K2Y7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mrpl47Q8K2Y7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl47Q8K2Y7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl47Q8K2Y7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Mrpl47Q8K2Y7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl47Q8K2Y7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.77■□□□□ 0.6
Mrpl47Q8K2Y7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.6
Mrpl47Q8K2Y7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl47Q8K2Y7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl47Q8K2Y7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl47Q8K2Y7 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Mrpl47Q8K2Y7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl47Q8K2Y7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mrpl47Q8K2Y7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Mrpl47Q8K2Y7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Mrpl47Q8K2Y7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Mrpl47Q8K2Y7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Mrpl47Q8K2Y7 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.77■□□□□ 0.59
Mrpl47Q8K2Y7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.76■□□□□ 0.59
Mrpl47Q8K2Y7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl47Q8K2Y7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.76■□□□□ 0.59
Mrpl47Q8K2Y7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Mrpl47Q8K2Y7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl47Q8K2Y7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Mrpl47Q8K2Y7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl47Q8K2Y7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl47Q8K2Y7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mrpl47Q8K2Y7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mrpl47Q8K2Y7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mrpl47Q8K2Y7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl47Q8K2Y7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl47Q8K2Y7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl47Q8K2Y7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl47Q8K2Y7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl47Q8K2Y7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.73■□□□□ 0.59
Mrpl47Q8K2Y7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl47Q8K2Y7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl47Q8K2Y7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl47Q8K2Y7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Mrpl47Q8K2Y7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms