Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.55■■□□□ 1.36
Smc5Q8CG46 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Smc5Q8CG46 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Smc5Q8CG46 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Smc5Q8CG46 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC23.55■■□□□ 1.36
Smc5Q8CG46 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.54■■□□□ 1.36
Smc5Q8CG46 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Smc5Q8CG46 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Smc5Q8CG46 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Smc5Q8CG46 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Smc5Q8CG46 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Smc5Q8CG46 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Smc5Q8CG46 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc5Q8CG46 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc5Q8CG46 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC23.53■■□□□ 1.36
Smc5Q8CG46 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc5Q8CG46 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc5Q8CG46 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc5Q8CG46 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc5Q8CG46 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.53■■□□□ 1.36
Smc5Q8CG46 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Smc5Q8CG46 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Smc5Q8CG46 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc5Q8CG46 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc5Q8CG46 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc5Q8CG46 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Smc5Q8CG46 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.53■■□□□ 1.36
Smc5Q8CG46 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Smc5Q8CG46 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Smc5Q8CG46 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Smc5Q8CG46 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Smc5Q8CG46 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Smc5Q8CG46 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Smc5Q8CG46 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC23.52■■□□□ 1.36
Smc5Q8CG46 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.52■■□□□ 1.36
Smc5Q8CG46 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Smc5Q8CG46 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Smc5Q8CG46 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Smc5Q8CG46 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Smc5Q8CG46 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.51■■□□□ 1.35
Smc5Q8CG46 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.51■■□□□ 1.35
Smc5Q8CG46 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Smc5Q8CG46 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC23.51■■□□□ 1.35
Smc5Q8CG46 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Smc5Q8CG46 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Smc5Q8CG46 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Smc5Q8CG46 Gm43137-201ENSMUST00000198052 594 ntBASIC23.5■■□□□ 1.35
Smc5Q8CG46 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Smc5Q8CG46 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Smc5Q8CG46 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
Smc5Q8CG46 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Smc5Q8CG46 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Smc5Q8CG46 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Smc5Q8CG46 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
Smc5Q8CG46 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Smc5Q8CG46 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Smc5Q8CG46 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Smc5Q8CG46 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Smc5Q8CG46 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Smc5Q8CG46 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Smc5Q8CG46 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Smc5Q8CG46 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Smc5Q8CG46 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Smc5Q8CG46 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Smc5Q8CG46 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Smc5Q8CG46 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Smc5Q8CG46 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Smc5Q8CG46 Gm43213-201ENSMUST00000151866 1790 ntBASIC23.48■■□□□ 1.35
Smc5Q8CG46 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Smc5Q8CG46 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.48■■□□□ 1.35
Smc5Q8CG46 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Smc5Q8CG46 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Smc5Q8CG46 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Smc5Q8CG46 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23.48■■□□□ 1.35
Smc5Q8CG46 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Smc5Q8CG46 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Smc5Q8CG46 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Smc5Q8CG46 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC23.47■■□□□ 1.35
Smc5Q8CG46 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Smc5Q8CG46 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Smc5Q8CG46 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Smc5Q8CG46 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Smc5Q8CG46 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Smc5Q8CG46 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Smc5Q8CG46 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Smc5Q8CG46 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Smc5Q8CG46 Gm42939-201ENSMUST00000197514 2205 ntBASIC23.47■■□□□ 1.35
Smc5Q8CG46 AC123834.2-201ENSMUST00000224038 2340 ntBASIC23.47■■□□□ 1.35
Smc5Q8CG46 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Smc5Q8CG46 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Smc5Q8CG46 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
Smc5Q8CG46 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.46■■□□□ 1.35
Smc5Q8CG46 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Smc5Q8CG46 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Smc5Q8CG46 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Smc5Q8CG46 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Smc5Q8CG46 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
Smc5Q8CG46 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Smc5Q8CG46 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Smc5Q8CG46 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.45■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms