Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb7Q8CDY9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhb7Q8CDY9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhb7Q8CDY9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb7Q8CDY9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb7Q8CDY9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb7Q8CDY9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 Gm11421-201ENSMUST00000122124 294 ntBASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb7Q8CDY9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb7Q8CDY9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb7Q8CDY9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb7Q8CDY9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb7Q8CDY9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb7Q8CDY9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb7Q8CDY9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
Pcdhb7Q8CDY9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdhb7Q8CDY9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb7Q8CDY9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb7Q8CDY9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdhb7Q8CDY9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb7Q8CDY9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb7Q8CDY9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb7Q8CDY9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb7Q8CDY9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.94■□□□□ 0.62
Pcdhb7Q8CDY9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb7Q8CDY9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pcdhb7Q8CDY9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb7Q8CDY9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb7Q8CDY9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb7Q8CDY9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb7Q8CDY9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb7Q8CDY9 Gm43017-201ENSMUST00000198296 752 ntBASIC18.93■□□□□ 0.62
Pcdhb7Q8CDY9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdhb7Q8CDY9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb7Q8CDY9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb7Q8CDY9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb7Q8CDY9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb7Q8CDY9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb7Q8CDY9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb7Q8CDY9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb7Q8CDY9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Pcdhb7Q8CDY9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb7Q8CDY9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhb7Q8CDY9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.92■□□□□ 0.62
Pcdhb7Q8CDY9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb7Q8CDY9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhb7Q8CDY9 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.91■□□□□ 0.62
Pcdhb7Q8CDY9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb7Q8CDY9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.91■□□□□ 0.62
Pcdhb7Q8CDY9 Gm26833-201ENSMUST00000180899 440 ntBASIC18.91■□□□□ 0.62
Pcdhb7Q8CDY9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb7Q8CDY9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb7Q8CDY9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhb7Q8CDY9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhb7Q8CDY9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhb7Q8CDY9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms