Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SynpoQ8CC35 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.27■□□□□ 0.52
SynpoQ8CC35 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SynpoQ8CC35 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SynpoQ8CC35 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SynpoQ8CC35 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SynpoQ8CC35 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
SynpoQ8CC35 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.27■□□□□ 0.51
SynpoQ8CC35 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.27■□□□□ 0.51
SynpoQ8CC35 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
SynpoQ8CC35 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SynpoQ8CC35 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SynpoQ8CC35 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SynpoQ8CC35 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.26■□□□□ 0.51
SynpoQ8CC35 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SynpoQ8CC35 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SynpoQ8CC35 AV356131-201ENSMUST00000206201 750 ntBASIC18.26■□□□□ 0.51
SynpoQ8CC35 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SynpoQ8CC35 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SynpoQ8CC35 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SynpoQ8CC35 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SynpoQ8CC35 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SynpoQ8CC35 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SynpoQ8CC35 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SynpoQ8CC35 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
SynpoQ8CC35 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
SynpoQ8CC35 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SynpoQ8CC35 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SynpoQ8CC35 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.25■□□□□ 0.51
SynpoQ8CC35 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.25■□□□□ 0.51
SynpoQ8CC35 Gm10033-202ENSMUST00000211874 928 ntBASIC18.25■□□□□ 0.51
SynpoQ8CC35 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SynpoQ8CC35 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SynpoQ8CC35 Gm9988-201ENSMUST00000069786 435 ntBASIC18.25■□□□□ 0.51
SynpoQ8CC35 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SynpoQ8CC35 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SynpoQ8CC35 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
SynpoQ8CC35 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SynpoQ8CC35 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SynpoQ8CC35 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SynpoQ8CC35 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SynpoQ8CC35 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SynpoQ8CC35 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SynpoQ8CC35 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SynpoQ8CC35 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SynpoQ8CC35 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SynpoQ8CC35 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SynpoQ8CC35 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SynpoQ8CC35 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.24■□□□□ 0.51
SynpoQ8CC35 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SynpoQ8CC35 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SynpoQ8CC35 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.23■□□□□ 0.51
SynpoQ8CC35 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.23■□□□□ 0.51
SynpoQ8CC35 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SynpoQ8CC35 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.23■□□□□ 0.51
SynpoQ8CC35 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SynpoQ8CC35 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.22■□□□□ 0.51
SynpoQ8CC35 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SynpoQ8CC35 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.22■□□□□ 0.51
SynpoQ8CC35 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.22■□□□□ 0.51
SynpoQ8CC35 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SynpoQ8CC35 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SynpoQ8CC35 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SynpoQ8CC35 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SynpoQ8CC35 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SynpoQ8CC35 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SynpoQ8CC35 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SynpoQ8CC35 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SynpoQ8CC35 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SynpoQ8CC35 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SynpoQ8CC35 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SynpoQ8CC35 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SynpoQ8CC35 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.21■□□□□ 0.51
SynpoQ8CC35 Gm27801-201ENSMUST00000184174 223 ntBASIC18.21■□□□□ 0.51
SynpoQ8CC35 Gm37179-201ENSMUST00000194862 823 ntBASIC18.21■□□□□ 0.51
SynpoQ8CC35 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SynpoQ8CC35 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SynpoQ8CC35 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.21■□□□□ 0.51
SynpoQ8CC35 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SynpoQ8CC35 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SynpoQ8CC35 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SynpoQ8CC35 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SynpoQ8CC35 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SynpoQ8CC35 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms