Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.84■□□□□ 0.77
Trerf1Q8BXJ2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trerf1Q8BXJ2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trerf1Q8BXJ2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.84■□□□□ 0.77
Trerf1Q8BXJ2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trerf1Q8BXJ2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trerf1Q8BXJ2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trerf1Q8BXJ2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.84■□□□□ 0.77
Trerf1Q8BXJ2 Gm43060-201ENSMUST00000200621 289 ntBASIC19.84■□□□□ 0.77
Trerf1Q8BXJ2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trerf1Q8BXJ2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trerf1Q8BXJ2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trerf1Q8BXJ2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trerf1Q8BXJ2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
Trerf1Q8BXJ2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trerf1Q8BXJ2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trerf1Q8BXJ2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trerf1Q8BXJ2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trerf1Q8BXJ2 Gm11421-201ENSMUST00000122124 294 ntBASIC19.83■□□□□ 0.77
Trerf1Q8BXJ2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trerf1Q8BXJ2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trerf1Q8BXJ2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trerf1Q8BXJ2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trerf1Q8BXJ2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Trerf1Q8BXJ2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trerf1Q8BXJ2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trerf1Q8BXJ2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trerf1Q8BXJ2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trerf1Q8BXJ2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Trerf1Q8BXJ2 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Trerf1Q8BXJ2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.82■□□□□ 0.76
Trerf1Q8BXJ2 Gm18284-201ENSMUST00000172604 624 ntBASIC19.82■□□□□ 0.76
Trerf1Q8BXJ2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trerf1Q8BXJ2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trerf1Q8BXJ2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trerf1Q8BXJ2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trerf1Q8BXJ2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trerf1Q8BXJ2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trerf1Q8BXJ2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trerf1Q8BXJ2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trerf1Q8BXJ2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trerf1Q8BXJ2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trerf1Q8BXJ2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.81■□□□□ 0.76
Trerf1Q8BXJ2 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.81■□□□□ 0.76
Trerf1Q8BXJ2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
Trerf1Q8BXJ2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.81■□□□□ 0.76
Trerf1Q8BXJ2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trerf1Q8BXJ2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trerf1Q8BXJ2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trerf1Q8BXJ2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trerf1Q8BXJ2 Gm8495-201ENSMUST00000188740 694 ntBASIC19.8■□□□□ 0.76
Trerf1Q8BXJ2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trerf1Q8BXJ2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trerf1Q8BXJ2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trerf1Q8BXJ2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trerf1Q8BXJ2 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.8■□□□□ 0.76
Trerf1Q8BXJ2 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.8■□□□□ 0.76
Trerf1Q8BXJ2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trerf1Q8BXJ2 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.79■□□□□ 0.76
Trerf1Q8BXJ2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.79■□□□□ 0.76
Trerf1Q8BXJ2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trerf1Q8BXJ2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trerf1Q8BXJ2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.79■□□□□ 0.76
Trerf1Q8BXJ2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trerf1Q8BXJ2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trerf1Q8BXJ2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.79■□□□□ 0.76
Trerf1Q8BXJ2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trerf1Q8BXJ2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trerf1Q8BXJ2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trerf1Q8BXJ2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trerf1Q8BXJ2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Trerf1Q8BXJ2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trerf1Q8BXJ2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trerf1Q8BXJ2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trerf1Q8BXJ2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trerf1Q8BXJ2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.78■□□□□ 0.76
Trerf1Q8BXJ2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.78■□□□□ 0.76
Trerf1Q8BXJ2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trerf1Q8BXJ2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.78■□□□□ 0.76
Trerf1Q8BXJ2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trerf1Q8BXJ2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Trerf1Q8BXJ2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trerf1Q8BXJ2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trerf1Q8BXJ2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trerf1Q8BXJ2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trerf1Q8BXJ2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trerf1Q8BXJ2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trerf1Q8BXJ2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Trerf1Q8BXJ2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trerf1Q8BXJ2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trerf1Q8BXJ2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Trerf1Q8BXJ2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trerf1Q8BXJ2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.77■□□□□ 0.76
Trerf1Q8BXJ2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trerf1Q8BXJ2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trerf1Q8BXJ2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trerf1Q8BXJ2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Trerf1Q8BXJ2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trerf1Q8BXJ2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trerf1Q8BXJ2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms