Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap1Q8BTW8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cdk5rap1Q8BTW8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap1Q8BTW8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap1Q8BTW8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Cdk5rap1Q8BTW8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdk5rap1Q8BTW8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cdk5rap1Q8BTW8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk5rap1Q8BTW8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk5rap1Q8BTW8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk5rap1Q8BTW8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk5rap1Q8BTW8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk5rap1Q8BTW8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk5rap1Q8BTW8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk5rap1Q8BTW8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.97■□□□□ 0.47
Cdk5rap1Q8BTW8 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.97■□□□□ 0.47
Cdk5rap1Q8BTW8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk5rap1Q8BTW8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cdk5rap1Q8BTW8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cdk5rap1Q8BTW8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 Gm6211-202ENSMUST00000167849 925 ntBASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cdk5rap1Q8BTW8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cdk5rap1Q8BTW8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cdk5rap1Q8BTW8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdk5rap1Q8BTW8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.95■□□□□ 0.46
Cdk5rap1Q8BTW8 Gm13148-201ENSMUST00000118892 745 ntBASIC17.95■□□□□ 0.46
Cdk5rap1Q8BTW8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdk5rap1Q8BTW8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdk5rap1Q8BTW8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.95■□□□□ 0.46
Cdk5rap1Q8BTW8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cdk5rap1Q8BTW8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cdk5rap1Q8BTW8 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.95■□□□□ 0.46
Cdk5rap1Q8BTW8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk5rap1Q8BTW8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk5rap1Q8BTW8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.94■□□□□ 0.46
Cdk5rap1Q8BTW8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk5rap1Q8BTW8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk5rap1Q8BTW8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk5rap1Q8BTW8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk5rap1Q8BTW8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Cdk5rap1Q8BTW8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk5rap1Q8BTW8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cdk5rap1Q8BTW8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdk5rap1Q8BTW8 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk5rap1Q8BTW8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk5rap1Q8BTW8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk5rap1Q8BTW8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk5rap1Q8BTW8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.93■□□□□ 0.46
Cdk5rap1Q8BTW8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk5rap1Q8BTW8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk5rap1Q8BTW8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdk5rap1Q8BTW8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Gm12441-201ENSMUST00000121806 588 ntBASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Cdk5rap1Q8BTW8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms