Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lig4Q8BTF7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.08■□□□□ 0.8
Lig4Q8BTF7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Lig4Q8BTF7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.07■□□□□ 0.8
Lig4Q8BTF7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lig4Q8BTF7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lig4Q8BTF7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lig4Q8BTF7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lig4Q8BTF7 Gm6420-201ENSMUST00000193885 723 ntBASIC20.07■□□□□ 0.8
Lig4Q8BTF7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.07■□□□□ 0.8
Lig4Q8BTF7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lig4Q8BTF7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lig4Q8BTF7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lig4Q8BTF7 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.07■□□□□ 0.8
Lig4Q8BTF7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.06■□□□□ 0.8
Lig4Q8BTF7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lig4Q8BTF7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.06■□□□□ 0.8
Lig4Q8BTF7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lig4Q8BTF7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lig4Q8BTF7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lig4Q8BTF7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lig4Q8BTF7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Lig4Q8BTF7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lig4Q8BTF7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lig4Q8BTF7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lig4Q8BTF7 Nespas-201ENSMUST00000143738 1083 ntBASIC20.05■□□□□ 0.8
Lig4Q8BTF7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Lig4Q8BTF7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Lig4Q8BTF7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lig4Q8BTF7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lig4Q8BTF7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lig4Q8BTF7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lig4Q8BTF7 Gm29257-201ENSMUST00000186115 639 ntBASIC20.04■□□□□ 0.8
Lig4Q8BTF7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.04■□□□□ 0.8
Lig4Q8BTF7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.04■□□□□ 0.8
Lig4Q8BTF7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Lig4Q8BTF7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lig4Q8BTF7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lig4Q8BTF7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lig4Q8BTF7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lig4Q8BTF7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lig4Q8BTF7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lig4Q8BTF7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Lig4Q8BTF7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lig4Q8BTF7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Lig4Q8BTF7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Lig4Q8BTF7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lig4Q8BTF7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lig4Q8BTF7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Lig4Q8BTF7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lig4Q8BTF7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lig4Q8BTF7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Lig4Q8BTF7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lig4Q8BTF7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lig4Q8BTF7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Lig4Q8BTF7 Gm12933-201ENSMUST00000120203 872 ntBASIC20.02■□□□□ 0.8
Lig4Q8BTF7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Lig4Q8BTF7 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.02■□□□□ 0.8
Lig4Q8BTF7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lig4Q8BTF7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lig4Q8BTF7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Lig4Q8BTF7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Lig4Q8BTF7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lig4Q8BTF7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Lig4Q8BTF7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig4Q8BTF7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lig4Q8BTF7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig4Q8BTF7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig4Q8BTF7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig4Q8BTF7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig4Q8BTF7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig4Q8BTF7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lig4Q8BTF7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Lig4Q8BTF7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig4Q8BTF7 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.01■□□□□ 0.79
Lig4Q8BTF7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lig4Q8BTF7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Lig4Q8BTF7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Lig4Q8BTF7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lig4Q8BTF7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Lig4Q8BTF7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
Lig4Q8BTF7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lig4Q8BTF7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20■□□□□ 0.79
Lig4Q8BTF7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Lig4Q8BTF7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20■□□□□ 0.79
Lig4Q8BTF7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lig4Q8BTF7 Gm10602-201ENSMUST00000098239 609 ntBASIC20■□□□□ 0.79
Lig4Q8BTF7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lig4Q8BTF7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lig4Q8BTF7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lig4Q8BTF7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20■□□□□ 0.79
Lig4Q8BTF7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Lig4Q8BTF7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Lig4Q8BTF7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20■□□□□ 0.79
Lig4Q8BTF7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Lig4Q8BTF7 Gm37352-201ENSMUST00000193908 2181 ntBASIC20■□□□□ 0.79
Lig4Q8BTF7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Lig4Q8BTF7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lig4Q8BTF7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Lig4Q8BTF7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms