Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Suds3Q8BR65 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Suds3Q8BR65 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Suds3Q8BR65 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Suds3Q8BR65 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.37■□□□□ 0.69
Suds3Q8BR65 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.37■□□□□ 0.69
Suds3Q8BR65 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Suds3Q8BR65 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Suds3Q8BR65 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.37■□□□□ 0.69
Suds3Q8BR65 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Suds3Q8BR65 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.36■□□□□ 0.69
Suds3Q8BR65 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.36■□□□□ 0.69
Suds3Q8BR65 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Suds3Q8BR65 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Suds3Q8BR65 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Suds3Q8BR65 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Suds3Q8BR65 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Suds3Q8BR65 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Suds3Q8BR65 Smad6-203ENSMUST00000179458 273 ntBASIC19.36■□□□□ 0.69
Suds3Q8BR65 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Suds3Q8BR65 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Suds3Q8BR65 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Suds3Q8BR65 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.36■□□□□ 0.69
Suds3Q8BR65 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Suds3Q8BR65 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Suds3Q8BR65 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Suds3Q8BR65 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Suds3Q8BR65 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Suds3Q8BR65 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.35■□□□□ 0.69
Suds3Q8BR65 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.35■□□□□ 0.69
Suds3Q8BR65 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Suds3Q8BR65 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Suds3Q8BR65 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Suds3Q8BR65 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Suds3Q8BR65 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.35■□□□□ 0.69
Suds3Q8BR65 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Suds3Q8BR65 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Suds3Q8BR65 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Suds3Q8BR65 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Suds3Q8BR65 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Suds3Q8BR65 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Suds3Q8BR65 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Suds3Q8BR65 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Suds3Q8BR65 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Suds3Q8BR65 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Suds3Q8BR65 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Suds3Q8BR65 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Suds3Q8BR65 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Suds3Q8BR65 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Suds3Q8BR65 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Suds3Q8BR65 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Suds3Q8BR65 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Suds3Q8BR65 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Suds3Q8BR65 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Suds3Q8BR65 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Suds3Q8BR65 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Suds3Q8BR65 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Suds3Q8BR65 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Suds3Q8BR65 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.33■□□□□ 0.68
Suds3Q8BR65 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Suds3Q8BR65 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Suds3Q8BR65 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Suds3Q8BR65 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Suds3Q8BR65 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.33■□□□□ 0.68
Suds3Q8BR65 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Suds3Q8BR65 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Suds3Q8BR65 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Suds3Q8BR65 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Suds3Q8BR65 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Suds3Q8BR65 Gm11421-201ENSMUST00000122124 294 ntBASIC19.32■□□□□ 0.68
Suds3Q8BR65 Gm18284-201ENSMUST00000172604 624 ntBASIC19.32■□□□□ 0.68
Suds3Q8BR65 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Suds3Q8BR65 Gm5874-201ENSMUST00000096101 508 ntBASIC19.32■□□□□ 0.68
Suds3Q8BR65 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Suds3Q8BR65 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Suds3Q8BR65 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Suds3Q8BR65 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Suds3Q8BR65 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Suds3Q8BR65 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Suds3Q8BR65 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Suds3Q8BR65 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Suds3Q8BR65 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Suds3Q8BR65 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.31■□□□□ 0.68
Suds3Q8BR65 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Suds3Q8BR65 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Suds3Q8BR65 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Suds3Q8BR65 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Suds3Q8BR65 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Suds3Q8BR65 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Suds3Q8BR65 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Suds3Q8BR65 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Suds3Q8BR65 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Suds3Q8BR65 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Suds3Q8BR65 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Suds3Q8BR65 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Suds3Q8BR65 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Suds3Q8BR65 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Suds3Q8BR65 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Suds3Q8BR65 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Suds3Q8BR65 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms