Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Gm12821-201ENSMUST00000120022 600 ntBASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Gm43137-201ENSMUST00000198052 594 ntBASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Rarb-207ENSMUST00000225921 2756 ntBASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap4Q8BMK4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ckap4Q8BMK4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ckap4Q8BMK4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ckap4Q8BMK4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ckap4Q8BMK4 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.87■□□□□ 0.45
Ckap4Q8BMK4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.87■□□□□ 0.45
Ckap4Q8BMK4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ckap4Q8BMK4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ckap4Q8BMK4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ckap4Q8BMK4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ckap4Q8BMK4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ckap4Q8BMK4 AA386476-201ENSMUST00000098781 1665 ntBASIC17.87■□□□□ 0.45
Ckap4Q8BMK4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ckap4Q8BMK4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ckap4Q8BMK4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Ckap4Q8BMK4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ckap4Q8BMK4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ckap4Q8BMK4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Ckap4Q8BMK4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ckap4Q8BMK4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ckap4Q8BMK4 Gm21956-201ENSMUST00000179946 522 ntBASIC17.86■□□□□ 0.45
Ckap4Q8BMK4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ckap4Q8BMK4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ckap4Q8BMK4 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.86■□□□□ 0.45
Ckap4Q8BMK4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ckap4Q8BMK4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ckap4Q8BMK4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ckap4Q8BMK4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ckap4Q8BMK4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ckap4Q8BMK4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ckap4Q8BMK4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Ckap4Q8BMK4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ckap4Q8BMK4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.83■□□□□ 0.45
Ckap4Q8BMK4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Ckap4Q8BMK4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ckap4Q8BMK4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Ckap4Q8BMK4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ckap4Q8BMK4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ckap4Q8BMK4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ckap4Q8BMK4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ckap4Q8BMK4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ckap4Q8BMK4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ckap4Q8BMK4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ckap4Q8BMK4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ckap4Q8BMK4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Ckap4Q8BMK4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms