Protein–RNA interactions for Protein: Q8BKN5

Tubgcp5, Gamma-tubulin complex component 5, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp5Q8BKN5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp5Q8BKN5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp5Q8BKN5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp5Q8BKN5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp5Q8BKN5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp5Q8BKN5 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.84■□□□□ 0.61
Tubgcp5Q8BKN5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp5Q8BKN5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tubgcp5Q8BKN5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp5Q8BKN5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp5Q8BKN5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp5Q8BKN5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tubgcp5Q8BKN5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.83■□□□□ 0.61
Tubgcp5Q8BKN5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tubgcp5Q8BKN5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tubgcp5Q8BKN5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Tubgcp5Q8BKN5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tubgcp5Q8BKN5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tubgcp5Q8BKN5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Tubgcp5Q8BKN5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tubgcp5Q8BKN5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubgcp5Q8BKN5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.83■□□□□ 0.6
Tubgcp5Q8BKN5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubgcp5Q8BKN5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tubgcp5Q8BKN5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubgcp5Q8BKN5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tubgcp5Q8BKN5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp5Q8BKN5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.8■□□□□ 0.6
Tubgcp5Q8BKN5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp5Q8BKN5 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.8■□□□□ 0.6
Tubgcp5Q8BKN5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp5Q8BKN5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp5Q8BKN5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp5Q8BKN5 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.8■□□□□ 0.6
Tubgcp5Q8BKN5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp5Q8BKN5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tubgcp5Q8BKN5 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp5Q8BKN5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Tubgcp5Q8BKN5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tubgcp5Q8BKN5 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.8■□□□□ 0.6
Tubgcp5Q8BKN5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp5Q8BKN5 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.79■□□□□ 0.6
Tubgcp5Q8BKN5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp5Q8BKN5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tubgcp5Q8BKN5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp5Q8BKN5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp5Q8BKN5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp5Q8BKN5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp5Q8BKN5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp5Q8BKN5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp5Q8BKN5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp5Q8BKN5 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.79■□□□□ 0.6
Tubgcp5Q8BKN5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp5Q8BKN5 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp5Q8BKN5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp5Q8BKN5 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.78■□□□□ 0.6
Tubgcp5Q8BKN5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tubgcp5Q8BKN5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp5Q8BKN5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp5Q8BKN5 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp5Q8BKN5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tubgcp5Q8BKN5 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Tubgcp5Q8BKN5 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.78■□□□□ 0.6
Tubgcp5Q8BKN5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tubgcp5Q8BKN5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubgcp5Q8BKN5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tubgcp5Q8BKN5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Tubgcp5Q8BKN5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms