Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.28■□□□□ 0.52
Rnf38Q8BI21 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf38Q8BI21 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf38Q8BI21 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf38Q8BI21 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf38Q8BI21 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.27■□□□□ 0.52
Rnf38Q8BI21 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Rnf38Q8BI21 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf38Q8BI21 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf38Q8BI21 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf38Q8BI21 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf38Q8BI21 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.27■□□□□ 0.52
Rnf38Q8BI21 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf38Q8BI21 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rnf38Q8BI21 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.27■□□□□ 0.51
Rnf38Q8BI21 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf38Q8BI21 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rnf38Q8BI21 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.27■□□□□ 0.51
Rnf38Q8BI21 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf38Q8BI21 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rnf38Q8BI21 Grk6-206ENSMUST00000224995 2971 ntBASIC18.26■□□□□ 0.51
Rnf38Q8BI21 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf38Q8BI21 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf38Q8BI21 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rnf38Q8BI21 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.26■□□□□ 0.51
Rnf38Q8BI21 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf38Q8BI21 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf38Q8BI21 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.26■□□□□ 0.51
Rnf38Q8BI21 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf38Q8BI21 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf38Q8BI21 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rnf38Q8BI21 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rnf38Q8BI21 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rnf38Q8BI21 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf38Q8BI21 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf38Q8BI21 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf38Q8BI21 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rnf38Q8BI21 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Rnf38Q8BI21 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf38Q8BI21 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.24■□□□□ 0.51
Rnf38Q8BI21 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rnf38Q8BI21 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf38Q8BI21 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf38Q8BI21 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf38Q8BI21 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf38Q8BI21 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.24■□□□□ 0.51
Rnf38Q8BI21 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rnf38Q8BI21 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Rnf38Q8BI21 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf38Q8BI21 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf38Q8BI21 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf38Q8BI21 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf38Q8BI21 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf38Q8BI21 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf38Q8BI21 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf38Q8BI21 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf38Q8BI21 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf38Q8BI21 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf38Q8BI21 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rnf38Q8BI21 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.22■□□□□ 0.51
Rnf38Q8BI21 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf38Q8BI21 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.22■□□□□ 0.51
Rnf38Q8BI21 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf38Q8BI21 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.22■□□□□ 0.51
Rnf38Q8BI21 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf38Q8BI21 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf38Q8BI21 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf38Q8BI21 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf38Q8BI21 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rnf38Q8BI21 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Rnf38Q8BI21 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf38Q8BI21 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf38Q8BI21 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf38Q8BI21 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf38Q8BI21 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf38Q8BI21 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf38Q8BI21 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf38Q8BI21 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf38Q8BI21 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Rnf38Q8BI21 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf38Q8BI21 Gm12251-201ENSMUST00000117893 792 ntBASIC18.21■□□□□ 0.51
Rnf38Q8BI21 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rnf38Q8BI21 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf38Q8BI21 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms