Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.09■□□□□ 0.49
Vrk1Q80X41 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vrk1Q80X41 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vrk1Q80X41 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Vrk1Q80X41 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vrk1Q80X41 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vrk1Q80X41 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vrk1Q80X41 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Vrk1Q80X41 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Vrk1Q80X41 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vrk1Q80X41 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vrk1Q80X41 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.08■□□□□ 0.48
Vrk1Q80X41 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vrk1Q80X41 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Vrk1Q80X41 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vrk1Q80X41 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vrk1Q80X41 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.08■□□□□ 0.48
Vrk1Q80X41 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vrk1Q80X41 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vrk1Q80X41 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.07■□□□□ 0.48
Vrk1Q80X41 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Vrk1Q80X41 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vrk1Q80X41 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vrk1Q80X41 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.07■□□□□ 0.48
Vrk1Q80X41 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vrk1Q80X41 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.07■□□□□ 0.48
Vrk1Q80X41 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.07■□□□□ 0.48
Vrk1Q80X41 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.07■□□□□ 0.48
Vrk1Q80X41 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Vrk1Q80X41 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.07■□□□□ 0.48
Vrk1Q80X41 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vrk1Q80X41 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vrk1Q80X41 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.06■□□□□ 0.48
Vrk1Q80X41 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vrk1Q80X41 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.06■□□□□ 0.48
Vrk1Q80X41 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vrk1Q80X41 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vrk1Q80X41 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Vrk1Q80X41 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.05■□□□□ 0.48
Vrk1Q80X41 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vrk1Q80X41 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.05■□□□□ 0.48
Vrk1Q80X41 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vrk1Q80X41 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Vrk1Q80X41 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.05■□□□□ 0.48
Vrk1Q80X41 Gm13168-201ENSMUST00000121771 632 ntBASIC18.05■□□□□ 0.48
Vrk1Q80X41 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Vrk1Q80X41 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.05■□□□□ 0.48
Vrk1Q80X41 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.05■□□□□ 0.48
Vrk1Q80X41 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vrk1Q80X41 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vrk1Q80X41 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vrk1Q80X41 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vrk1Q80X41 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.05■□□□□ 0.48
Vrk1Q80X41 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vrk1Q80X41 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vrk1Q80X41 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vrk1Q80X41 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vrk1Q80X41 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Vrk1Q80X41 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Vrk1Q80X41 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vrk1Q80X41 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vrk1Q80X41 Gm37856-201ENSMUST00000191634 999 ntBASIC18.03■□□□□ 0.48
Vrk1Q80X41 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.03■□□□□ 0.48
Vrk1Q80X41 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Vrk1Q80X41 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vrk1Q80X41 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vrk1Q80X41 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vrk1Q80X41 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
Vrk1Q80X41 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vrk1Q80X41 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms