Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.19■□□□□ 0.5
Otop1Q80VM9 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.19■□□□□ 0.5
Otop1Q80VM9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.19■□□□□ 0.5
Otop1Q80VM9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Otop1Q80VM9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Otop1Q80VM9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.18■□□□□ 0.5
Otop1Q80VM9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Otop1Q80VM9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Otop1Q80VM9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Otop1Q80VM9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Otop1Q80VM9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Otop1Q80VM9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Otop1Q80VM9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Gm27275-201ENSMUST00000184318 272 ntBASIC18.17■□□□□ 0.5
Otop1Q80VM9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.17■□□□□ 0.5
Otop1Q80VM9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Otop1Q80VM9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Otop1Q80VM9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Otop1Q80VM9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Otop1Q80VM9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Otop1Q80VM9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Otop1Q80VM9 Gm13836-201ENSMUST00000121159 501 ntBASIC18.16■□□□□ 0.5
Otop1Q80VM9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.16■□□□□ 0.5
Otop1Q80VM9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Otop1Q80VM9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Otop1Q80VM9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Otop1Q80VM9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Otop1Q80VM9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Otop1Q80VM9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otop1Q80VM9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otop1Q80VM9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Otop1Q80VM9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otop1Q80VM9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otop1Q80VM9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Otop1Q80VM9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.15■□□□□ 0.5
Otop1Q80VM9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otop1Q80VM9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otop1Q80VM9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otop1Q80VM9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otop1Q80VM9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Otop1Q80VM9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Otop1Q80VM9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Otop1Q80VM9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Otop1Q80VM9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Otop1Q80VM9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Otop1Q80VM9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Otop1Q80VM9 AA386476-201ENSMUST00000098781 1665 ntBASIC18.14■□□□□ 0.49
Otop1Q80VM9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Otop1Q80VM9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Otop1Q80VM9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Otop1Q80VM9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.13■□□□□ 0.49
Otop1Q80VM9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Otop1Q80VM9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Otop1Q80VM9 Gm12896-201ENSMUST00000118430 226 ntBASIC18.13■□□□□ 0.49
Otop1Q80VM9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Otop1Q80VM9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.13■□□□□ 0.49
Otop1Q80VM9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Otop1Q80VM9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Otop1Q80VM9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Otop1Q80VM9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Otop1Q80VM9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Otop1Q80VM9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.12■□□□□ 0.49
Otop1Q80VM9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.12■□□□□ 0.49
Otop1Q80VM9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Otop1Q80VM9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Otop1Q80VM9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Otop1Q80VM9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Otop1Q80VM9 Golph3-202ENSMUST00000226517 2359 ntBASIC18.11■□□□□ 0.49
Otop1Q80VM9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otop1Q80VM9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Otop1Q80VM9 Gm6576-201ENSMUST00000169678 883 ntBASIC18.11■□□□□ 0.49
Otop1Q80VM9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms