Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Rpap1Q80TE0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Rpap1Q80TE0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC29.74■■■□□ 2.35
Rpap1Q80TE0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Rpap1Q80TE0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rpap1Q80TE0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC29.73■■■□□ 2.35
Rpap1Q80TE0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC29.73■■■□□ 2.35
Rpap1Q80TE0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rpap1Q80TE0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
Rpap1Q80TE0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rpap1Q80TE0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rpap1Q80TE0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rpap1Q80TE0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rpap1Q80TE0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rpap1Q80TE0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rpap1Q80TE0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Rpap1Q80TE0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Rpap1Q80TE0 Mir1199-201ENSMUST00000117015 119 ntBASIC29.72■■■□□ 2.35
Rpap1Q80TE0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC29.72■■■□□ 2.35
Rpap1Q80TE0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Rpap1Q80TE0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC29.72■■■□□ 2.35
Rpap1Q80TE0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Rpap1Q80TE0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Rpap1Q80TE0 Gm43672-201ENSMUST00000199072 1731 ntBASIC29.72■■■□□ 2.35
Rpap1Q80TE0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Rpap1Q80TE0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Rpap1Q80TE0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rpap1Q80TE0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rpap1Q80TE0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC29.71■■■□□ 2.35
Rpap1Q80TE0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC29.71■■■□□ 2.35
Rpap1Q80TE0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rpap1Q80TE0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rpap1Q80TE0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rpap1Q80TE0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rpap1Q80TE0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rpap1Q80TE0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rpap1Q80TE0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rpap1Q80TE0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Rpap1Q80TE0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.35
Rpap1Q80TE0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC29.7■■■□□ 2.35
Rpap1Q80TE0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.34
Rpap1Q80TE0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC29.7■■■□□ 2.34
Rpap1Q80TE0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC29.7■■■□□ 2.34
Rpap1Q80TE0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC29.7■■■□□ 2.34
Rpap1Q80TE0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC29.7■■■□□ 2.34
Rpap1Q80TE0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Rpap1Q80TE0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
Rpap1Q80TE0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Rpap1Q80TE0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Rpap1Q80TE0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Rpap1Q80TE0 Gm11643-201ENSMUST00000119578 864 ntBASIC29.69■■■□□ 2.34
Rpap1Q80TE0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Rpap1Q80TE0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC29.68■■■□□ 2.34
Rpap1Q80TE0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC29.68■■■□□ 2.34
Rpap1Q80TE0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Rpap1Q80TE0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
Rpap1Q80TE0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC29.68■■■□□ 2.34
Rpap1Q80TE0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC29.68■■■□□ 2.34
Rpap1Q80TE0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC29.68■■■□□ 2.34
Rpap1Q80TE0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC29.68■■■□□ 2.34
Rpap1Q80TE0 Gm19094-201ENSMUST00000209791 1246 ntBASIC29.68■■■□□ 2.34
Rpap1Q80TE0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC29.68■■■□□ 2.34
Rpap1Q80TE0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Rpap1Q80TE0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Rpap1Q80TE0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Rpap1Q80TE0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Rpap1Q80TE0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
Rpap1Q80TE0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC29.67■■■□□ 2.34
Rpap1Q80TE0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Rpap1Q80TE0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Rpap1Q80TE0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Rpap1Q80TE0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Rpap1Q80TE0 Gm15378-201ENSMUST00000121894 207 ntBASIC29.66■■■□□ 2.34
Rpap1Q80TE0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rpap1Q80TE0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rpap1Q80TE0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rpap1Q80TE0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rpap1Q80TE0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Rpap1Q80TE0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Rpap1Q80TE0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC29.65■■■□□ 2.34
Rpap1Q80TE0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Rpap1Q80TE0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Rpap1Q80TE0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Rpap1Q80TE0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
Rpap1Q80TE0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Rpap1Q80TE0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Rpap1Q80TE0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
Rpap1Q80TE0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Rpap1Q80TE0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Rpap1Q80TE0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Rpap1Q80TE0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC29.64■■■□□ 2.34
Rpap1Q80TE0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Rpap1Q80TE0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.33
Rpap1Q80TE0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
Rpap1Q80TE0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rpap1Q80TE0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Rpap1Q80TE0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC29.63■■■□□ 2.33
Rpap1Q80TE0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rpap1Q80TE0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rpap1Q80TE0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms