Protein–RNA interactions for Protein: Q6PHU5

Sort1, Sortilin, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1Q6PHU5 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sort1Q6PHU5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sort1Q6PHU5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sort1Q6PHU5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sort1Q6PHU5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sort1Q6PHU5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sort1Q6PHU5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sort1Q6PHU5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sort1Q6PHU5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.72■□□□□ 0.59
Sort1Q6PHU5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.72■□□□□ 0.59
Sort1Q6PHU5 Grk6-206ENSMUST00000224995 2971 ntBASIC18.72■□□□□ 0.59
Sort1Q6PHU5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Sort1Q6PHU5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sort1Q6PHU5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sort1Q6PHU5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sort1Q6PHU5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sort1Q6PHU5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sort1Q6PHU5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sort1Q6PHU5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sort1Q6PHU5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sort1Q6PHU5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.71■□□□□ 0.59
Sort1Q6PHU5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.71■□□□□ 0.59
Sort1Q6PHU5 Gm43137-201ENSMUST00000198052 594 ntBASIC18.71■□□□□ 0.59
Sort1Q6PHU5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.71■□□□□ 0.59
Sort1Q6PHU5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sort1Q6PHU5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sort1Q6PHU5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sort1Q6PHU5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sort1Q6PHU5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Sort1Q6PHU5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.7■□□□□ 0.58
Sort1Q6PHU5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.69■□□□□ 0.58
Sort1Q6PHU5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sort1Q6PHU5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sort1Q6PHU5 Rarb-207ENSMUST00000225921 2756 ntBASIC18.69■□□□□ 0.58
Sort1Q6PHU5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sort1Q6PHU5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sort1Q6PHU5 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.69■□□□□ 0.58
Sort1Q6PHU5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sort1Q6PHU5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sort1Q6PHU5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sort1Q6PHU5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sort1Q6PHU5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sort1Q6PHU5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sort1Q6PHU5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sort1Q6PHU5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.68■□□□□ 0.58
Sort1Q6PHU5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.68■□□□□ 0.58
Sort1Q6PHU5 Gm9847-201ENSMUST00000052528 599 ntBASIC18.68■□□□□ 0.58
Sort1Q6PHU5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sort1Q6PHU5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.68■□□□□ 0.58
Sort1Q6PHU5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sort1Q6PHU5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sort1Q6PHU5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sort1Q6PHU5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sort1Q6PHU5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Sort1Q6PHU5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.67■□□□□ 0.58
Sort1Q6PHU5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.67■□□□□ 0.58
Sort1Q6PHU5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sort1Q6PHU5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sort1Q6PHU5 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sort1Q6PHU5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sort1Q6PHU5 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.67■□□□□ 0.58
Sort1Q6PHU5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sort1Q6PHU5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sort1Q6PHU5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.67■□□□□ 0.58
Sort1Q6PHU5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sort1Q6PHU5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.67■□□□□ 0.58
Sort1Q6PHU5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sort1Q6PHU5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sort1Q6PHU5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sort1Q6PHU5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Sort1Q6PHU5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sort1Q6PHU5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sort1Q6PHU5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sort1Q6PHU5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sort1Q6PHU5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sort1Q6PHU5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sort1Q6PHU5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sort1Q6PHU5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.66■□□□□ 0.58
Sort1Q6PHU5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sort1Q6PHU5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sort1Q6PHU5 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms