Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.94■□□□□ 0.94
Krt39Q6IFX4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Krt39Q6IFX4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Krt39Q6IFX4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt39Q6IFX4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt39Q6IFX4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt39Q6IFX4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt39Q6IFX4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.92■□□□□ 0.94
Krt39Q6IFX4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Krt39Q6IFX4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt39Q6IFX4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt39Q6IFX4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt39Q6IFX4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Krt39Q6IFX4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt39Q6IFX4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Krt39Q6IFX4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt39Q6IFX4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt39Q6IFX4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt39Q6IFX4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt39Q6IFX4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt39Q6IFX4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt39Q6IFX4 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt39Q6IFX4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.91■□□□□ 0.94
Krt39Q6IFX4 Rarb-207ENSMUST00000225921 2756 ntBASIC20.91■□□□□ 0.94
Krt39Q6IFX4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Krt39Q6IFX4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.89■□□□□ 0.94
Krt39Q6IFX4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Krt39Q6IFX4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Krt39Q6IFX4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.94
Krt39Q6IFX4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.89■□□□□ 0.93
Krt39Q6IFX4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Krt39Q6IFX4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.89■□□□□ 0.93
Krt39Q6IFX4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Krt39Q6IFX4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Krt39Q6IFX4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Krt39Q6IFX4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Krt39Q6IFX4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Krt39Q6IFX4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Krt39Q6IFX4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt39Q6IFX4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Krt39Q6IFX4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt39Q6IFX4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt39Q6IFX4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt39Q6IFX4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt39Q6IFX4 Gm12821-201ENSMUST00000120022 600 ntBASIC20.88■□□□□ 0.93
Krt39Q6IFX4 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.88■□□□□ 0.93
Krt39Q6IFX4 Spcs1-204ENSMUST00000226782 949 ntBASIC20.88■□□□□ 0.93
Krt39Q6IFX4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt39Q6IFX4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Krt39Q6IFX4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt39Q6IFX4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt39Q6IFX4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Grk6-206ENSMUST00000224995 2971 ntBASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms