Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Foxn1Q61575 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.79■■□□□ 1.08
Foxn1Q61575 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxn1Q61575 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxn1Q61575 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxn1Q61575 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxn1Q61575 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Foxn1Q61575 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
Foxn1Q61575 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Foxn1Q61575 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxn1Q61575 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxn1Q61575 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Foxn1Q61575 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxn1Q61575 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Foxn1Q61575 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxn1Q61575 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Foxn1Q61575 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxn1Q61575 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.78■■□□□ 1.08
Foxn1Q61575 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.78■■□□□ 1.08
Foxn1Q61575 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxn1Q61575 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxn1Q61575 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxn1Q61575 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Foxn1Q61575 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Foxn1Q61575 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Foxn1Q61575 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Foxn1Q61575 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.77■■□□□ 1.08
Foxn1Q61575 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Foxn1Q61575 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.77■■□□□ 1.08
Foxn1Q61575 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Foxn1Q61575 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Foxn1Q61575 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Foxn1Q61575 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Foxn1Q61575 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Foxn1Q61575 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Foxn1Q61575 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.07
Foxn1Q61575 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Foxn1Q61575 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Foxn1Q61575 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Foxn1Q61575 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Foxn1Q61575 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Foxn1Q61575 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Foxn1Q61575 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.76■■□□□ 1.07
Foxn1Q61575 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Foxn1Q61575 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Foxn1Q61575 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Foxn1Q61575 AA386476-201ENSMUST00000098781 1665 ntBASIC21.75■■□□□ 1.07
Foxn1Q61575 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Foxn1Q61575 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Foxn1Q61575 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Foxn1Q61575 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Foxn1Q61575 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.75■■□□□ 1.07
Foxn1Q61575 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Foxn1Q61575 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.74■■□□□ 1.07
Foxn1Q61575 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Foxn1Q61575 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.74■■□□□ 1.07
Foxn1Q61575 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.74■■□□□ 1.07
Foxn1Q61575 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Foxn1Q61575 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Foxn1Q61575 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Foxn1Q61575 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Foxn1Q61575 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Foxn1Q61575 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Foxn1Q61575 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Foxn1Q61575 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Foxn1Q61575 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.73■■□□□ 1.07
Foxn1Q61575 AC175538.1-201ENSMUST00000225343 1269 ntBASIC21.73■■□□□ 1.07
Foxn1Q61575 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Foxn1Q61575 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Foxn1Q61575 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Foxn1Q61575 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Foxn1Q61575 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Foxn1Q61575 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Foxn1Q61575 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Foxn1Q61575 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxn1Q61575 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxn1Q61575 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxn1Q61575 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Foxn1Q61575 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Foxn1Q61575 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxn1Q61575 Gm30025-201ENSMUST00000218555 728 ntBASIC21.72■■□□□ 1.07
Foxn1Q61575 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxn1Q61575 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxn1Q61575 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxn1Q61575 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxn1Q61575 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxn1Q61575 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxn1Q61575 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxn1Q61575 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Foxn1Q61575 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxn1Q61575 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Foxn1Q61575 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxn1Q61575 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Foxn1Q61575 Gm18101-201ENSMUST00000215769 548 ntBASIC21.71■■□□□ 1.07
Foxn1Q61575 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxn1Q61575 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxn1Q61575 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
Foxn1Q61575 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxn1Q61575 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Foxn1Q61575 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms