Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Foxc1Q61572 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Foxc1Q61572 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Foxc1Q61572 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Foxc1Q61572 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
Foxc1Q61572 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Foxc1Q61572 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxc1Q61572 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxc1Q61572 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Foxc1Q61572 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Foxc1Q61572 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxc1Q61572 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Foxc1Q61572 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.83□□□□□ -0.2
Foxc1Q61572 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Foxc1Q61572 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
Foxc1Q61572 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC13.83□□□□□ -0.2
Foxc1Q61572 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Foxc1Q61572 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxc1Q61572 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxc1Q61572 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxc1Q61572 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxc1Q61572 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxc1Q61572 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxc1Q61572 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Foxc1Q61572 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Foxc1Q61572 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.82□□□□□ -0.2
Foxc1Q61572 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxc1Q61572 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxc1Q61572 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Foxc1Q61572 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxc1Q61572 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxc1Q61572 Gm42778-201ENSMUST00000199644 553 ntBASIC13.82□□□□□ -0.2
Foxc1Q61572 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Foxc1Q61572 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxc1Q61572 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxc1Q61572 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxc1Q61572 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxc1Q61572 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Foxc1Q61572 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxc1Q61572 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Foxc1Q61572 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.82□□□□□ -0.2
Foxc1Q61572 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Foxc1Q61572 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Foxc1Q61572 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.81□□□□□ -0.2
Foxc1Q61572 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.81□□□□□ -0.2
Foxc1Q61572 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.81□□□□□ -0.2
Foxc1Q61572 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.81□□□□□ -0.2
Foxc1Q61572 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Dapk1-207ENSMUST00000226059 5009 ntBASIC13.81□□□□□ -0.2
Foxc1Q61572 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Foxc1Q61572 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Foxc1Q61572 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC13.81□□□□□ -0.2
Foxc1Q61572 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxc1Q61572 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxc1Q61572 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Foxc1Q61572 Gm42911-201ENSMUST00000199360 1630 ntBASIC13.8□□□□□ -0.2
Foxc1Q61572 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxc1Q61572 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxc1Q61572 Gm19891-201ENSMUST00000189771 303 ntBASIC13.8□□□□□ -0.2
Foxc1Q61572 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxc1Q61572 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Foxc1Q61572 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxc1Q61572 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Foxc1Q61572 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxc1Q61572 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxc1Q61572 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxc1Q61572 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxc1Q61572 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Foxc1Q61572 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Foxc1Q61572 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxc1Q61572 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Foxc1Q61572 Gm27405-201ENSMUST00000184201 112 ntBASIC13.79□□□□□ -0.2
Foxc1Q61572 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxc1Q61572 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.79□□□□□ -0.2
Foxc1Q61572 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Foxc1Q61572 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxc1Q61572 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxc1Q61572 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxc1Q61572 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxc1Q61572 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxc1Q61572 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxc1Q61572 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Foxc1Q61572 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Foxc1Q61572 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Foxc1Q61572 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Foxc1Q61572 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms