Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hcfc1Q61191 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hcfc1Q61191 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Hcfc1Q61191 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcfc1Q61191 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Hcfc1Q61191 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hcfc1Q61191 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.09■□□□□ 0.17
Hcfc1Q61191 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcfc1Q61191 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Hcfc1Q61191 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hcfc1Q61191 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Hcfc1Q61191 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hcfc1Q61191 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcfc1Q61191 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.08■□□□□ 0.16
Hcfc1Q61191 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.08■□□□□ 0.16
Hcfc1Q61191 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.08■□□□□ 0.16
Hcfc1Q61191 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcfc1Q61191 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcfc1Q61191 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcfc1Q61191 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcfc1Q61191 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcfc1Q61191 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.08■□□□□ 0.16
Hcfc1Q61191 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hcfc1Q61191 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hcfc1Q61191 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hcfc1Q61191 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.07■□□□□ 0.16
Hcfc1Q61191 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.07■□□□□ 0.16
Hcfc1Q61191 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Hcfc1Q61191 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hcfc1Q61191 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hcfc1Q61191 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hcfc1Q61191 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hcfc1Q61191 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.07■□□□□ 0.16
Hcfc1Q61191 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hcfc1Q61191 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Hcfc1Q61191 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hcfc1Q61191 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.07■□□□□ 0.16
Hcfc1Q61191 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hcfc1Q61191 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Hcfc1Q61191 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Hcfc1Q61191 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hcfc1Q61191 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hcfc1Q61191 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hcfc1Q61191 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Hcfc1Q61191 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hcfc1Q61191 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hcfc1Q61191 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hcfc1Q61191 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hcfc1Q61191 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.06■□□□□ 0.16
Hcfc1Q61191 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.06■□□□□ 0.16
Hcfc1Q61191 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Hcfc1Q61191 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hcfc1Q61191 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Hcfc1Q61191 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hcfc1Q61191 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hcfc1Q61191 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Hcfc1Q61191 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Hcfc1Q61191 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.05■□□□□ 0.16
Hcfc1Q61191 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.04■□□□□ 0.16
Hcfc1Q61191 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Hcfc1Q61191 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.04■□□□□ 0.16
Hcfc1Q61191 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcfc1Q61191 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hcfc1Q61191 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.04■□□□□ 0.16
Hcfc1Q61191 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcfc1Q61191 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.04■□□□□ 0.16
Hcfc1Q61191 Gm18666-201ENSMUST00000190039 958 ntBASIC16.04■□□□□ 0.16
Hcfc1Q61191 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Hcfc1Q61191 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hcfc1Q61191 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Hcfc1Q61191 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcfc1Q61191 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.03■□□□□ 0.16
Hcfc1Q61191 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.03■□□□□ 0.16
Hcfc1Q61191 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.03■□□□□ 0.16
Hcfc1Q61191 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Hcfc1Q61191 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcfc1Q61191 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcfc1Q61191 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcfc1Q61191 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Hcfc1Q61191 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcfc1Q61191 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcfc1Q61191 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcfc1Q61191 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Hcfc1Q61191 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms