Protein–RNA interactions for Protein: Q5SSE9

Abca13, ATP-binding cassette sub-family A member 13, mousemouse

Predictions only

Length 5,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca13Q5SSE9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.4□□□□□ -0.58
Abca13Q5SSE9 Gm21814-202ENSMUST00000203277 873 ntBASIC11.4□□□□□ -0.58
Abca13Q5SSE9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca13Q5SSE9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca13Q5SSE9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca13Q5SSE9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.4□□□□□ -0.58
Abca13Q5SSE9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Abca13Q5SSE9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Abca13Q5SSE9 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.4□□□□□ -0.59
Abca13Q5SSE9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Abca13Q5SSE9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.4□□□□□ -0.59
Abca13Q5SSE9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Abca13Q5SSE9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Abca13Q5SSE9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Mzt1-203ENSMUST00000227948 952 ntBASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Abca13Q5SSE9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Gm44549-201ENSMUST00000208351 577 ntBASIC11.38□□□□□ -0.59
Abca13Q5SSE9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Abca13Q5SSE9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca13Q5SSE9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC11.37□□□□□ -0.59
Abca13Q5SSE9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca13Q5SSE9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca13Q5SSE9 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.37□□□□□ -0.59
Abca13Q5SSE9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca13Q5SSE9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.37□□□□□ -0.59
Abca13Q5SSE9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca13Q5SSE9 Gm30025-201ENSMUST00000218555 728 ntBASIC11.37□□□□□ -0.59
Abca13Q5SSE9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca13Q5SSE9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca13Q5SSE9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca13Q5SSE9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca13Q5SSE9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Abca13Q5SSE9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC11.37□□□□□ -0.59
Abca13Q5SSE9 Gm6802-201ENSMUST00000167843 1983 ntBASIC11.36□□□□□ -0.59
Abca13Q5SSE9 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.36□□□□□ -0.59
Abca13Q5SSE9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca13Q5SSE9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Abca13Q5SSE9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Abca13Q5SSE9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca13Q5SSE9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Abca13Q5SSE9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Abca13Q5SSE9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Abca13Q5SSE9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Abca13Q5SSE9 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.36□□□□□ -0.59
Abca13Q5SSE9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Abca13Q5SSE9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Abca13Q5SSE9 Gm43909-201ENSMUST00000203443 1876 ntBASIC11.36□□□□□ -0.59
Abca13Q5SSE9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Abca13Q5SSE9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms