Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.5■□□□□ 0.07
Trav8d-1Q5R1H8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav8d-1Q5R1H8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
Trav8d-1Q5R1H8 Gm13241-201ENSMUST00000094493 780 ntBASIC15.5■□□□□ 0.07
Trav8d-1Q5R1H8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8d-1Q5R1H8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8d-1Q5R1H8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav8d-1Q5R1H8 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav8d-1Q5R1H8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav8d-1Q5R1H8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.47■□□□□ 0.07
Trav8d-1Q5R1H8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav8d-1Q5R1H8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8d-1Q5R1H8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Trav8d-1Q5R1H8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8d-1Q5R1H8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8d-1Q5R1H8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8d-1Q5R1H8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8d-1Q5R1H8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8d-1Q5R1H8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8d-1Q5R1H8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8d-1Q5R1H8 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav8d-1Q5R1H8 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.46■□□□□ 0.06
Trav8d-1Q5R1H8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav8d-1Q5R1H8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.44■□□□□ 0.06
Trav8d-1Q5R1H8 BC021767-201ENSMUST00000126387 1716 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms