Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Col27a1Q5QNQ9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Col27a1Q5QNQ9 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Gm11539-201ENSMUST00000119837 557 ntBASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Gm13436-201ENSMUST00000120418 567 ntBASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Col27a1Q5QNQ9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col27a1Q5QNQ9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.63■□□□□ 0.57
Col27a1Q5QNQ9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Col27a1Q5QNQ9 Gm13559-201ENSMUST00000120476 863 ntBASIC18.63■□□□□ 0.57
Col27a1Q5QNQ9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col27a1Q5QNQ9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col27a1Q5QNQ9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.63■□□□□ 0.57
Col27a1Q5QNQ9 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col27a1Q5QNQ9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Col27a1Q5QNQ9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col27a1Q5QNQ9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Col27a1Q5QNQ9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Col27a1Q5QNQ9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Col27a1Q5QNQ9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col27a1Q5QNQ9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col27a1Q5QNQ9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col27a1Q5QNQ9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.62■□□□□ 0.57
Col27a1Q5QNQ9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col27a1Q5QNQ9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col27a1Q5QNQ9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col27a1Q5QNQ9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col27a1Q5QNQ9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col27a1Q5QNQ9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.61■□□□□ 0.57
Col27a1Q5QNQ9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col27a1Q5QNQ9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col27a1Q5QNQ9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Col27a1Q5QNQ9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col27a1Q5QNQ9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col27a1Q5QNQ9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col27a1Q5QNQ9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.6■□□□□ 0.57
Col27a1Q5QNQ9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.6■□□□□ 0.57
Col27a1Q5QNQ9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col27a1Q5QNQ9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col27a1Q5QNQ9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col27a1Q5QNQ9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col27a1Q5QNQ9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col27a1Q5QNQ9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col27a1Q5QNQ9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col27a1Q5QNQ9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Col27a1Q5QNQ9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col27a1Q5QNQ9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col27a1Q5QNQ9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col27a1Q5QNQ9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col27a1Q5QNQ9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col27a1Q5QNQ9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col27a1Q5QNQ9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Col27a1Q5QNQ9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.58■□□□□ 0.57
Col27a1Q5QNQ9 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.58■□□□□ 0.57
Col27a1Q5QNQ9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Col27a1Q5QNQ9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col27a1Q5QNQ9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col27a1Q5QNQ9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col27a1Q5QNQ9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col27a1Q5QNQ9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col27a1Q5QNQ9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col27a1Q5QNQ9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col27a1Q5QNQ9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Col27a1Q5QNQ9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Col27a1Q5QNQ9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Col27a1Q5QNQ9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Col27a1Q5QNQ9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col27a1Q5QNQ9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col27a1Q5QNQ9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col27a1Q5QNQ9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.57■□□□□ 0.56
Col27a1Q5QNQ9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Col27a1Q5QNQ9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col27a1Q5QNQ9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.57■□□□□ 0.56
Col27a1Q5QNQ9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.57■□□□□ 0.56
Col27a1Q5QNQ9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Col27a1Q5QNQ9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.57■□□□□ 0.56
Col27a1Q5QNQ9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col27a1Q5QNQ9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms