Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps41Q5KU39 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps41Q5KU39 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Vps41Q5KU39 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps41Q5KU39 BC021767-201ENSMUST00000126387 1716 ntBASIC19.74■□□□□ 0.75
Vps41Q5KU39 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps41Q5KU39 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps41Q5KU39 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.74■□□□□ 0.75
Vps41Q5KU39 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps41Q5KU39 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.74■□□□□ 0.75
Vps41Q5KU39 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Vps41Q5KU39 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps41Q5KU39 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps41Q5KU39 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps41Q5KU39 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps41Q5KU39 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Vps41Q5KU39 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps41Q5KU39 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps41Q5KU39 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps41Q5KU39 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Vps41Q5KU39 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps41Q5KU39 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.73■□□□□ 0.75
Vps41Q5KU39 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.73■□□□□ 0.75
Vps41Q5KU39 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Vps41Q5KU39 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Vps41Q5KU39 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps41Q5KU39 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Vps41Q5KU39 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps41Q5KU39 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vps41Q5KU39 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.72■□□□□ 0.75
Vps41Q5KU39 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps41Q5KU39 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps41Q5KU39 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps41Q5KU39 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps41Q5KU39 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Vps41Q5KU39 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps41Q5KU39 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps41Q5KU39 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Vps41Q5KU39 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps41Q5KU39 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps41Q5KU39 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Vps41Q5KU39 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Vps41Q5KU39 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps41Q5KU39 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Vps41Q5KU39 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps41Q5KU39 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps41Q5KU39 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps41Q5KU39 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps41Q5KU39 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
Vps41Q5KU39 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
Vps41Q5KU39 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps41Q5KU39 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps41Q5KU39 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Vps41Q5KU39 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Vps41Q5KU39 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Vps41Q5KU39 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Vps41Q5KU39 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.7■□□□□ 0.74
Vps41Q5KU39 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Vps41Q5KU39 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps41Q5KU39 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps41Q5KU39 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps41Q5KU39 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Vps41Q5KU39 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Vps41Q5KU39 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Vps41Q5KU39 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vps41Q5KU39 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Gm45102-201ENSMUST00000207427 857 ntBASIC19.68■□□□□ 0.74
Vps41Q5KU39 Rps24-207ENSMUST00000224568 714 ntBASIC19.68■□□□□ 0.74
Vps41Q5KU39 Serp2-204ENSMUST00000228055 705 ntBASIC19.68■□□□□ 0.74
Vps41Q5KU39 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms