Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Urb1Q571H0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Urb1Q571H0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Urb1Q571H0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
Urb1Q571H0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.43■□□□□ 0.38
Urb1Q571H0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Urb1Q571H0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Urb1Q571H0 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Urb1Q571H0 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.42■□□□□ 0.38
Urb1Q571H0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Urb1Q571H0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Urb1Q571H0 Gm37055-201ENSMUST00000191866 133 ntBASIC17.42■□□□□ 0.38
Urb1Q571H0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.42■□□□□ 0.38
Urb1Q571H0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.42■□□□□ 0.38
Urb1Q571H0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Urb1Q571H0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Urb1Q571H0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Urb1Q571H0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Urb1Q571H0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Urb1Q571H0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.42■□□□□ 0.38
Urb1Q571H0 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
Urb1Q571H0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Urb1Q571H0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Urb1Q571H0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Urb1Q571H0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Urb1Q571H0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Urb1Q571H0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Urb1Q571H0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Urb1Q571H0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 Gm12896-201ENSMUST00000118430 226 ntBASIC17.41■□□□□ 0.38
Urb1Q571H0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 AA386476-201ENSMUST00000098781 1665 ntBASIC17.41■□□□□ 0.38
Urb1Q571H0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Urb1Q571H0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Urb1Q571H0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Urb1Q571H0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Urb1Q571H0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Urb1Q571H0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Urb1Q571H0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Urb1Q571H0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Urb1Q571H0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Urb1Q571H0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Urb1Q571H0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Urb1Q571H0 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.4■□□□□ 0.38
Urb1Q571H0 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.4■□□□□ 0.38
Urb1Q571H0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Urb1Q571H0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Urb1Q571H0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.4■□□□□ 0.38
Urb1Q571H0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Urb1Q571H0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Urb1Q571H0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Urb1Q571H0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.4■□□□□ 0.38
Urb1Q571H0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Urb1Q571H0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Urb1Q571H0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.39■□□□□ 0.37
Urb1Q571H0 Gm2559-201ENSMUST00000201323 363 ntBASIC17.39■□□□□ 0.37
Urb1Q571H0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Urb1Q571H0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Urb1Q571H0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Urb1Q571H0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.38■□□□□ 0.37
Urb1Q571H0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.38■□□□□ 0.37
Urb1Q571H0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.38■□□□□ 0.37
Urb1Q571H0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.38■□□□□ 0.37
Urb1Q571H0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Urb1Q571H0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Urb1Q571H0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Urb1Q571H0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Urb1Q571H0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Urb1Q571H0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Urb1Q571H0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Urb1Q571H0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Urb1Q571H0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Urb1Q571H0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Urb1Q571H0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Urb1Q571H0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Urb1Q571H0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Urb1Q571H0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.37■□□□□ 0.37
Urb1Q571H0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
Urb1Q571H0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.37■□□□□ 0.37
Urb1Q571H0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Urb1Q571H0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Urb1Q571H0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Urb1Q571H0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Urb1Q571H0 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.37■□□□□ 0.37
Urb1Q571H0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Urb1Q571H0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Urb1Q571H0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Urb1Q571H0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms