Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp30Q3UN04 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp30Q3UN04 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp30Q3UN04 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.09■□□□□ 0.65
Usp30Q3UN04 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp30Q3UN04 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp30Q3UN04 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp30Q3UN04 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Usp30Q3UN04 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Usp30Q3UN04 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp30Q3UN04 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp30Q3UN04 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Usp30Q3UN04 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.09■□□□□ 0.65
Usp30Q3UN04 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp30Q3UN04 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Usp30Q3UN04 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Usp30Q3UN04 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Usp30Q3UN04 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Usp30Q3UN04 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp30Q3UN04 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.08■□□□□ 0.64
Usp30Q3UN04 Gm8520-201ENSMUST00000186517 868 ntBASIC19.08■□□□□ 0.64
Usp30Q3UN04 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.08■□□□□ 0.64
Usp30Q3UN04 Rab3c-203ENSMUST00000224180 967 ntBASIC19.08■□□□□ 0.64
Usp30Q3UN04 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp30Q3UN04 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp30Q3UN04 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp30Q3UN04 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Usp30Q3UN04 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp30Q3UN04 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Usp30Q3UN04 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Usp30Q3UN04 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Usp30Q3UN04 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp30Q3UN04 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.07■□□□□ 0.64
Usp30Q3UN04 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp30Q3UN04 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Usp30Q3UN04 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp30Q3UN04 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp30Q3UN04 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.07■□□□□ 0.64
Usp30Q3UN04 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.07■□□□□ 0.64
Usp30Q3UN04 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.07■□□□□ 0.64
Usp30Q3UN04 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.07■□□□□ 0.64
Usp30Q3UN04 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp30Q3UN04 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp30Q3UN04 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp30Q3UN04 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp30Q3UN04 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Usp30Q3UN04 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp30Q3UN04 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Usp30Q3UN04 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Usp30Q3UN04 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp30Q3UN04 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp30Q3UN04 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp30Q3UN04 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp30Q3UN04 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp30Q3UN04 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Usp30Q3UN04 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Usp30Q3UN04 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Usp30Q3UN04 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Usp30Q3UN04 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Usp30Q3UN04 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp30Q3UN04 Gm22240-201ENSMUST00000175225 82 ntBASIC19.05■□□□□ 0.64
Usp30Q3UN04 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.05■□□□□ 0.64
Usp30Q3UN04 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Usp30Q3UN04 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Usp30Q3UN04 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Usp30Q3UN04 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp30Q3UN04 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp30Q3UN04 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Usp30Q3UN04 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Usp30Q3UN04 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp30Q3UN04 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp30Q3UN04 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Usp30Q3UN04 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp30Q3UN04 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.04■□□□□ 0.64
Usp30Q3UN04 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp30Q3UN04 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Usp30Q3UN04 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Usp30Q3UN04 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.03■□□□□ 0.64
Usp30Q3UN04 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp30Q3UN04 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp30Q3UN04 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp30Q3UN04 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp30Q3UN04 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Usp30Q3UN04 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp30Q3UN04 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Usp30Q3UN04 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Usp30Q3UN04 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.02■□□□□ 0.64
Usp30Q3UN04 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.02■□□□□ 0.64
Usp30Q3UN04 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp30Q3UN04 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp30Q3UN04 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp30Q3UN04 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Usp30Q3UN04 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.02■□□□□ 0.64
Usp30Q3UN04 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.02■□□□□ 0.64
Usp30Q3UN04 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Usp30Q3UN04 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp30Q3UN04 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Usp30Q3UN04 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp30Q3UN04 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Usp30Q3UN04 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms