Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Spg11Q3UHA3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg11Q3UHA3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg11Q3UHA3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg11Q3UHA3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.68■□□□□ 0.42
Spg11Q3UHA3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg11Q3UHA3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Spg11Q3UHA3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg11Q3UHA3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg11Q3UHA3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Spg11Q3UHA3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Spg11Q3UHA3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Spg11Q3UHA3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Spg11Q3UHA3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.67■□□□□ 0.42
Spg11Q3UHA3 Gm12382-201ENSMUST00000122005 922 ntBASIC17.67■□□□□ 0.42
Spg11Q3UHA3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Spg11Q3UHA3 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.67■□□□□ 0.42
Spg11Q3UHA3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg11Q3UHA3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg11Q3UHA3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Spg11Q3UHA3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg11Q3UHA3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Spg11Q3UHA3 Gm18959-201ENSMUST00000208954 655 ntBASIC17.67■□□□□ 0.42
Spg11Q3UHA3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Spg11Q3UHA3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg11Q3UHA3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Spg11Q3UHA3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Spg11Q3UHA3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg11Q3UHA3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Spg11Q3UHA3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg11Q3UHA3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg11Q3UHA3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg11Q3UHA3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Spg11Q3UHA3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg11Q3UHA3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg11Q3UHA3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Spg11Q3UHA3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.66■□□□□ 0.42
Spg11Q3UHA3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Spg11Q3UHA3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.65■□□□□ 0.42
Spg11Q3UHA3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Spg11Q3UHA3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Spg11Q3UHA3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Spg11Q3UHA3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Spg11Q3UHA3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.65■□□□□ 0.42
Spg11Q3UHA3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.65■□□□□ 0.42
Spg11Q3UHA3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Spg11Q3UHA3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Spg11Q3UHA3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.64■□□□□ 0.42
Spg11Q3UHA3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Spg11Q3UHA3 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.64■□□□□ 0.41
Spg11Q3UHA3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg11Q3UHA3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.64■□□□□ 0.41
Spg11Q3UHA3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Spg11Q3UHA3 Gm17661-201ENSMUST00000170317 270 ntBASIC17.64■□□□□ 0.41
Spg11Q3UHA3 Gm3375-201ENSMUST00000203929 796 ntBASIC17.64■□□□□ 0.41
Spg11Q3UHA3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Spg11Q3UHA3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg11Q3UHA3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Spg11Q3UHA3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg11Q3UHA3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Spg11Q3UHA3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.64■□□□□ 0.41
Spg11Q3UHA3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Spg11Q3UHA3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Spg11Q3UHA3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Spg11Q3UHA3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Spg11Q3UHA3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Spg11Q3UHA3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Spg11Q3UHA3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Spg11Q3UHA3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.63■□□□□ 0.41
Spg11Q3UHA3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Spg11Q3UHA3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Spg11Q3UHA3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Spg11Q3UHA3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Spg11Q3UHA3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Spg11Q3UHA3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Spg11Q3UHA3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.62■□□□□ 0.41
Spg11Q3UHA3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Spg11Q3UHA3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Spg11Q3UHA3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Spg11Q3UHA3 Gm45058-201ENSMUST00000205810 766 ntBASIC17.62■□□□□ 0.41
Spg11Q3UHA3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Spg11Q3UHA3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.62■□□□□ 0.41
Spg11Q3UHA3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Spg11Q3UHA3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Spg11Q3UHA3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.61■□□□□ 0.41
Spg11Q3UHA3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Spg11Q3UHA3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Spg11Q3UHA3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Spg11Q3UHA3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Spg11Q3UHA3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.61■□□□□ 0.41
Spg11Q3UHA3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Spg11Q3UHA3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.61■□□□□ 0.41
Spg11Q3UHA3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Spg11Q3UHA3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Spg11Q3UHA3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Spg11Q3UHA3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms