Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC30.44■■■□□ 2.46
Shroom4Q1W617 Nrn1-203ENSMUST00000223611 1443 ntBASIC30.43■■■□□ 2.46
Shroom4Q1W617 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Shroom4Q1W617 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Shroom4Q1W617 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Shroom4Q1W617 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC30.43■■■□□ 2.46
Shroom4Q1W617 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Shroom4Q1W617 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
Shroom4Q1W617 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
Shroom4Q1W617 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Shroom4Q1W617 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC30.42■■■□□ 2.46
Shroom4Q1W617 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC30.42■■■□□ 2.46
Shroom4Q1W617 AC154649.1-201ENSMUST00000227392 384 ntBASIC30.42■■■□□ 2.46
Shroom4Q1W617 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Shroom4Q1W617 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Shroom4Q1W617 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
Shroom4Q1W617 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Shroom4Q1W617 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Shroom4Q1W617 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Shroom4Q1W617 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
Shroom4Q1W617 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC30.41■■■□□ 2.46
Shroom4Q1W617 Gm37055-201ENSMUST00000191866 133 ntBASIC30.41■■■□□ 2.46
Shroom4Q1W617 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Shroom4Q1W617 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Shroom4Q1W617 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Shroom4Q1W617 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Shroom4Q1W617 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Shroom4Q1W617 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC30.4■■■□□ 2.46
Shroom4Q1W617 Krtap5-1-202ENSMUST00000188274 742 ntBASIC30.4■■■□□ 2.46
Shroom4Q1W617 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC30.4■■■□□ 2.46
Shroom4Q1W617 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Shroom4Q1W617 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Shroom4Q1W617 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Shroom4Q1W617 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Shroom4Q1W617 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Shroom4Q1W617 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Shroom4Q1W617 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC30.39■■■□□ 2.46
Shroom4Q1W617 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC30.39■■■□□ 2.46
Shroom4Q1W617 Wnt10b-205ENSMUST00000226846 1204 ntBASIC30.39■■■□□ 2.46
Shroom4Q1W617 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
Shroom4Q1W617 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Shroom4Q1W617 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Shroom4Q1W617 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Shroom4Q1W617 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Shroom4Q1W617 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Shroom4Q1W617 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Shroom4Q1W617 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC30.38■■■□□ 2.45
Shroom4Q1W617 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
Shroom4Q1W617 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
Shroom4Q1W617 Gm15847-201ENSMUST00000121417 1065 ntBASIC30.38■■■□□ 2.45
Shroom4Q1W617 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC30.38■■■□□ 2.45
Shroom4Q1W617 AL672049.1-201ENSMUST00000197943 91 ntBASIC30.38■■■□□ 2.45
Shroom4Q1W617 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC30.38■■■□□ 2.45
Shroom4Q1W617 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Shroom4Q1W617 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Shroom4Q1W617 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
Shroom4Q1W617 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Shroom4Q1W617 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Shroom4Q1W617 Mir1199-201ENSMUST00000117015 119 ntBASIC30.37■■■□□ 2.45
Shroom4Q1W617 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Shroom4Q1W617 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Shroom4Q1W617 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Shroom4Q1W617 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Shroom4Q1W617 Gm45640-201ENSMUST00000210665 1896 ntBASIC30.37■■■□□ 2.45
Shroom4Q1W617 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Shroom4Q1W617 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Shroom4Q1W617 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Shroom4Q1W617 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Shroom4Q1W617 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Shroom4Q1W617 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Shroom4Q1W617 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Shroom4Q1W617 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC30.36■■■□□ 2.45
Shroom4Q1W617 Gm15565-201ENSMUST00000118890 427 ntBASIC30.36■■■□□ 2.45
Shroom4Q1W617 Gm13158-201ENSMUST00000122007 736 ntBASIC30.36■■■□□ 2.45
Shroom4Q1W617 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
Shroom4Q1W617 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Shroom4Q1W617 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Shroom4Q1W617 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Shroom4Q1W617 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Shroom4Q1W617 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Shroom4Q1W617 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Shroom4Q1W617 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Shroom4Q1W617 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Shroom4Q1W617 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC30.34■■■□□ 2.45
Shroom4Q1W617 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Shroom4Q1W617 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Shroom4Q1W617 Gm5540-201ENSMUST00000131852 1848 ntBASIC30.34■■■□□ 2.45
Shroom4Q1W617 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Shroom4Q1W617 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Shroom4Q1W617 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Shroom4Q1W617 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
Shroom4Q1W617 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Shroom4Q1W617 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Shroom4Q1W617 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Shroom4Q1W617 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Shroom4Q1W617 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC30.33■■■□□ 2.45
Shroom4Q1W617 Gm37352-201ENSMUST00000193908 2181 ntBASIC30.33■■■□□ 2.45
Shroom4Q1W617 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Shroom4Q1W617 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
Shroom4Q1W617 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC30.32■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms