Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Chd8Q09XV5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Chd8Q09XV5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Chd8Q09XV5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.2■□□□□ 0.34
Chd8Q09XV5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Chd8Q09XV5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd8Q09XV5 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.2■□□□□ 0.34
Chd8Q09XV5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd8Q09XV5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd8Q09XV5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd8Q09XV5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd8Q09XV5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd8Q09XV5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd8Q09XV5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd8Q09XV5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd8Q09XV5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd8Q09XV5 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.19■□□□□ 0.34
Chd8Q09XV5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Chd8Q09XV5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Chd8Q09XV5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Chd8Q09XV5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Chd8Q09XV5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.18■□□□□ 0.34
Chd8Q09XV5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd8Q09XV5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chd8Q09XV5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd8Q09XV5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd8Q09XV5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.18■□□□□ 0.34
Chd8Q09XV5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd8Q09XV5 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.18■□□□□ 0.34
Chd8Q09XV5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Chd8Q09XV5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd8Q09XV5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd8Q09XV5 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd8Q09XV5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd8Q09XV5 Gm24589-201ENSMUST00000116692 94 ntBASIC17.17■□□□□ 0.34
Chd8Q09XV5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd8Q09XV5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd8Q09XV5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.16■□□□□ 0.34
Chd8Q09XV5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.16■□□□□ 0.34
Chd8Q09XV5 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.16■□□□□ 0.34
Chd8Q09XV5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd8Q09XV5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd8Q09XV5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd8Q09XV5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Chd8Q09XV5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Chd8Q09XV5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Chd8Q09XV5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Chd8Q09XV5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd8Q09XV5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd8Q09XV5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd8Q09XV5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd8Q09XV5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chd8Q09XV5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chd8Q09XV5 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chd8Q09XV5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd8Q09XV5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chd8Q09XV5 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.14■□□□□ 0.33
Chd8Q09XV5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd8Q09XV5 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.14■□□□□ 0.33
Chd8Q09XV5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.14■□□□□ 0.33
Chd8Q09XV5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd8Q09XV5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.13■□□□□ 0.33
Chd8Q09XV5 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Chd8Q09XV5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd8Q09XV5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd8Q09XV5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.13■□□□□ 0.33
Chd8Q09XV5 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chd8Q09XV5 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.13■□□□□ 0.33
Chd8Q09XV5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd8Q09XV5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd8Q09XV5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd8Q09XV5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd8Q09XV5 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chd8Q09XV5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd8Q09XV5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chd8Q09XV5 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Chd8Q09XV5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd8Q09XV5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Chd8Q09XV5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.12■□□□□ 0.33
Chd8Q09XV5 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd8Q09XV5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Chd8Q09XV5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd8Q09XV5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd8Q09XV5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chd8Q09XV5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd8Q09XV5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd8Q09XV5 Gm5864-201ENSMUST00000202263 970 ntBASIC17.11■□□□□ 0.33
Chd8Q09XV5 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.11■□□□□ 0.33
Chd8Q09XV5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd8Q09XV5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd8Q09XV5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd8Q09XV5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd8Q09XV5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd8Q09XV5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Chd8Q09XV5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd8Q09XV5 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.11■□□□□ 0.33
Chd8Q09XV5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Chd8Q09XV5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd8Q09XV5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd8Q09XV5 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms