Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Sox4Q06831 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox4Q06831 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sox4Q06831 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox4Q06831 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox4Q06831 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox4Q06831 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox4Q06831 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Sox4Q06831 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox4Q06831 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox4Q06831 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Sox4Q06831 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox4Q06831 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox4Q06831 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox4Q06831 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox4Q06831 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Sox4Q06831 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.64■□□□□ 0.57
Sox4Q06831 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox4Q06831 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sox4Q06831 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.63■□□□□ 0.57
Sox4Q06831 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.63■□□□□ 0.57
Sox4Q06831 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox4Q06831 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.63■□□□□ 0.57
Sox4Q06831 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sox4Q06831 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox4Q06831 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sox4Q06831 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sox4Q06831 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Sox4Q06831 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sox4Q06831 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox4Q06831 Gm13534-201ENSMUST00000121169 513 ntBASIC18.62■□□□□ 0.57
Sox4Q06831 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sox4Q06831 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.62■□□□□ 0.57
Sox4Q06831 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.62■□□□□ 0.57
Sox4Q06831 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.62■□□□□ 0.57
Sox4Q06831 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Sox4Q06831 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox4Q06831 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox4Q06831 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox4Q06831 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sox4Q06831 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox4Q06831 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.61■□□□□ 0.57
Sox4Q06831 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.61■□□□□ 0.57
Sox4Q06831 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sox4Q06831 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Sox4Q06831 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sox4Q06831 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sox4Q06831 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
Sox4Q06831 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox4Q06831 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox4Q06831 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox4Q06831 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.6■□□□□ 0.57
Sox4Q06831 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sox4Q06831 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sox4Q06831 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.6■□□□□ 0.57
Sox4Q06831 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox4Q06831 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox4Q06831 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox4Q06831 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox4Q06831 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox4Q06831 Gm37179-201ENSMUST00000194862 823 ntBASIC18.59■□□□□ 0.57
Sox4Q06831 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox4Q06831 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sox4Q06831 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sox4Q06831 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Sox4Q06831 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Sox4Q06831 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
Sox4Q06831 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sox4Q06831 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.58■□□□□ 0.56
Sox4Q06831 Gm6420-201ENSMUST00000193885 723 ntBASIC18.58■□□□□ 0.56
Sox4Q06831 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sox4Q06831 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sox4Q06831 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox4Q06831 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox4Q06831 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox4Q06831 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Sox4Q06831 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox4Q06831 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox4Q06831 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Sox4Q06831 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sox4Q06831 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sox4Q06831 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox4Q06831 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox4Q06831 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox4Q06831 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox4Q06831 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox4Q06831 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox4Q06831 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sox4Q06831 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.57■□□□□ 0.56
Sox4Q06831 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox4Q06831 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox4Q06831 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox4Q06831 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.57■□□□□ 0.56
Sox4Q06831 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Sox4Q06831 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sox4Q06831 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox4Q06831 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.56■□□□□ 0.56
Sox4Q06831 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sox4Q06831 Nespas-201ENSMUST00000143738 1083 ntBASIC18.56■□□□□ 0.56
Sox4Q06831 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms