Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.66■□□□□ 0.58
Lhx1P63006 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx1P63006 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx1P63006 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx1P63006 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx1P63006 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx1P63006 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Lhx1P63006 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx1P63006 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.65■□□□□ 0.58
Lhx1P63006 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Lhx1P63006 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx1P63006 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx1P63006 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx1P63006 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.65■□□□□ 0.58
Lhx1P63006 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Lhx1P63006 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx1P63006 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx1P63006 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx1P63006 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.64■□□□□ 0.57
Lhx1P63006 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx1P63006 Mir5133-201ENSMUST00000174955 77 ntBASIC18.64■□□□□ 0.57
Lhx1P63006 Gm29257-201ENSMUST00000186115 639 ntBASIC18.64■□□□□ 0.57
Lhx1P63006 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx1P63006 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx1P63006 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx1P63006 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx1P63006 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx1P63006 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Lhx1P63006 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx1P63006 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx1P63006 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx1P63006 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.63■□□□□ 0.57
Lhx1P63006 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx1P63006 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lhx1P63006 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.63■□□□□ 0.57
Lhx1P63006 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx1P63006 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx1P63006 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx1P63006 Gm6365-201ENSMUST00000054711 744 ntBASIC18.63■□□□□ 0.57
Lhx1P63006 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx1P63006 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx1P63006 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx1P63006 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Lhx1P63006 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lhx1P63006 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.62■□□□□ 0.57
Lhx1P63006 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Lhx1P63006 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx1P63006 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx1P63006 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx1P63006 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx1P63006 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx1P63006 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx1P63006 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Lhx1P63006 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx1P63006 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx1P63006 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx1P63006 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx1P63006 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Lhx1P63006 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx1P63006 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx1P63006 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Lhx1P63006 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx1P63006 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx1P63006 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx1P63006 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx1P63006 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.6■□□□□ 0.57
Lhx1P63006 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx1P63006 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx1P63006 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx1P63006 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx1P63006 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx1P63006 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx1P63006 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx1P63006 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx1P63006 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx1P63006 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
Lhx1P63006 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Lhx1P63006 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx1P63006 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx1P63006 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx1P63006 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx1P63006 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.59■□□□□ 0.57
Lhx1P63006 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.59■□□□□ 0.57
Lhx1P63006 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx1P63006 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx1P63006 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Lhx1P63006 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Lhx1P63006 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx1P63006 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx1P63006 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Lhx1P63006 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lhx1P63006 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.58■□□□□ 0.57
Lhx1P63006 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.58■□□□□ 0.57
Lhx1P63006 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lhx1P63006 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lhx1P63006 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.58■□□□□ 0.56
Lhx1P63006 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.58■□□□□ 0.56
Lhx1P63006 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lhx1P63006 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lhx1P63006 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms