Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp46P62069 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp46P62069 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Usp46P62069 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.8■□□□□ 0.76
Usp46P62069 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp46P62069 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.8■□□□□ 0.76
Usp46P62069 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Usp46P62069 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp46P62069 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp46P62069 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp46P62069 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp46P62069 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp46P62069 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp46P62069 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.79■□□□□ 0.76
Usp46P62069 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp46P62069 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Usp46P62069 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp46P62069 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp46P62069 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp46P62069 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
Usp46P62069 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp46P62069 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp46P62069 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp46P62069 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp46P62069 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp46P62069 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Usp46P62069 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.78■□□□□ 0.76
Usp46P62069 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Usp46P62069 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp46P62069 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp46P62069 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp46P62069 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp46P62069 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Usp46P62069 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Usp46P62069 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp46P62069 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Usp46P62069 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp46P62069 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp46P62069 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp46P62069 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp46P62069 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.77■□□□□ 0.76
Usp46P62069 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.77■□□□□ 0.76
Usp46P62069 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp46P62069 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Usp46P62069 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.77■□□□□ 0.76
Usp46P62069 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp46P62069 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp46P62069 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Usp46P62069 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp46P62069 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp46P62069 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp46P62069 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp46P62069 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.76■□□□□ 0.75
Usp46P62069 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp46P62069 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp46P62069 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Usp46P62069 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp46P62069 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp46P62069 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp46P62069 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp46P62069 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp46P62069 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp46P62069 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.76■□□□□ 0.75
Usp46P62069 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.76■□□□□ 0.75
Usp46P62069 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp46P62069 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.76■□□□□ 0.75
Usp46P62069 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp46P62069 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp46P62069 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.75■□□□□ 0.75
Usp46P62069 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp46P62069 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp46P62069 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp46P62069 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Usp46P62069 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp46P62069 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp46P62069 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp46P62069 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp46P62069 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp46P62069 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp46P62069 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp46P62069 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp46P62069 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp46P62069 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp46P62069 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Usp46P62069 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp46P62069 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp46P62069 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp46P62069 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp46P62069 Mir5133-201ENSMUST00000174955 77 ntBASIC19.74■□□□□ 0.75
Usp46P62069 Gm6365-201ENSMUST00000054711 744 ntBASIC19.74■□□□□ 0.75
Usp46P62069 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.74■□□□□ 0.75
Usp46P62069 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usp46P62069 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Usp46P62069 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp46P62069 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp46P62069 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usp46P62069 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Usp46P62069 Gm13148-201ENSMUST00000118892 745 ntBASIC19.73■□□□□ 0.75
Usp46P62069 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.73■□□□□ 0.75
Usp46P62069 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms