Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh5P55284 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh5P55284 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cdh5P55284 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cdh5P55284 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh5P55284 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh5P55284 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh5P55284 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh5P55284 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdh5P55284 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh5P55284 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh5P55284 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh5P55284 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh5P55284 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh5P55284 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cdh5P55284 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh5P55284 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh5P55284 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh5P55284 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cdh5P55284 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh5P55284 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Cdh5P55284 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh5P55284 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Cdh5P55284 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh5P55284 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh5P55284 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.39■□□□□ 0.53
Cdh5P55284 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh5P55284 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Cdh5P55284 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.39■□□□□ 0.53
Cdh5P55284 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh5P55284 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh5P55284 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh5P55284 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.39■□□□□ 0.53
Cdh5P55284 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh5P55284 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh5P55284 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh5P55284 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.38■□□□□ 0.53
Cdh5P55284 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cdh5P55284 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh5P55284 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh5P55284 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh5P55284 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh5P55284 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.38■□□□□ 0.53
Cdh5P55284 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh5P55284 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.38■□□□□ 0.53
Cdh5P55284 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh5P55284 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cdh5P55284 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.38■□□□□ 0.53
Cdh5P55284 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh5P55284 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.38■□□□□ 0.53
Cdh5P55284 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh5P55284 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh5P55284 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh5P55284 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh5P55284 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdh5P55284 Mir6236-201ENSMUST00000184437 123 ntBASIC18.37■□□□□ 0.53
Cdh5P55284 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh5P55284 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.37■□□□□ 0.53
Cdh5P55284 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh5P55284 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh5P55284 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh5P55284 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh5P55284 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh5P55284 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh5P55284 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh5P55284 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh5P55284 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.36■□□□□ 0.53
Cdh5P55284 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.36■□□□□ 0.53
Cdh5P55284 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh5P55284 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh5P55284 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh5P55284 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh5P55284 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh5P55284 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cdh5P55284 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Cdh5P55284 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Cdh5P55284 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cdh5P55284 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh5P55284 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh5P55284 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh5P55284 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh5P55284 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh5P55284 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh5P55284 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh5P55284 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Cdh5P55284 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh5P55284 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh5P55284 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh5P55284 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh5P55284 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh5P55284 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh5P55284 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdh5P55284 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh5P55284 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh5P55284 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdh5P55284 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cdh5P55284 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh5P55284 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh5P55284 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.34■□□□□ 0.53
Cdh5P55284 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms