Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.57■□□□□ 0.56
Limk1P53668 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Limk1P53668 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.57■□□□□ 0.56
Limk1P53668 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Limk1P53668 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Limk1P53668 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Limk1P53668 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Limk1P53668 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk1P53668 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Limk1P53668 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk1P53668 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk1P53668 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk1P53668 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk1P53668 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk1P53668 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk1P53668 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk1P53668 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk1P53668 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.56■□□□□ 0.56
Limk1P53668 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk1P53668 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk1P53668 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Limk1P53668 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk1P53668 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Limk1P53668 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.56■□□□□ 0.56
Limk1P53668 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Limk1P53668 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk1P53668 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Limk1P53668 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.55■□□□□ 0.56
Limk1P53668 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Limk1P53668 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Limk1P53668 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Limk1P53668 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Limk1P53668 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Limk1P53668 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Limk1P53668 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Limk1P53668 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.55■□□□□ 0.56
Limk1P53668 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.55■□□□□ 0.56
Limk1P53668 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Limk1P53668 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Limk1P53668 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Limk1P53668 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Limk1P53668 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Limk1P53668 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Limk1P53668 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Limk1P53668 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Limk1P53668 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Limk1P53668 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Limk1P53668 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Limk1P53668 Gm12896-201ENSMUST00000118430 226 ntBASIC18.54■□□□□ 0.56
Limk1P53668 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Limk1P53668 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.54■□□□□ 0.56
Limk1P53668 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.54■□□□□ 0.56
Limk1P53668 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.54■□□□□ 0.56
Limk1P53668 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Limk1P53668 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Limk1P53668 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Limk1P53668 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Limk1P53668 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Limk1P53668 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.53■□□□□ 0.56
Limk1P53668 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Limk1P53668 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Limk1P53668 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Limk1P53668 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.53■□□□□ 0.56
Limk1P53668 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Limk1P53668 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Limk1P53668 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Limk1P53668 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Limk1P53668 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Limk1P53668 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Limk1P53668 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Limk1P53668 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Limk1P53668 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.52■□□□□ 0.56
Limk1P53668 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Limk1P53668 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.52■□□□□ 0.56
Limk1P53668 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Limk1P53668 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Limk1P53668 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Limk1P53668 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Limk1P53668 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Limk1P53668 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Limk1P53668 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Limk1P53668 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Limk1P53668 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Limk1P53668 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Limk1P53668 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Limk1P53668 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Limk1P53668 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Limk1P53668 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
Limk1P53668 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Limk1P53668 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Limk1P53668 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.51■□□□□ 0.55
Limk1P53668 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.51■□□□□ 0.55
Limk1P53668 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Limk1P53668 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Limk1P53668 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Limk1P53668 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Limk1P53668 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Limk1P53668 Gm15565-201ENSMUST00000118890 427 ntBASIC18.5■□□□□ 0.55
Limk1P53668 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Limk1P53668 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms