Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl1P12850 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl1P12850 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl1P12850 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.7■□□□□ 0.1
Cxcl1P12850 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cxcl1P12850 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl1P12850 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl1P12850 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cxcl1P12850 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl1P12850 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.7■□□□□ 0.1
Cxcl1P12850 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl1P12850 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl1P12850 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cxcl1P12850 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cxcl1P12850 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl1P12850 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl1P12850 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cxcl1P12850 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cxcl1P12850 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl1P12850 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.69■□□□□ 0.1
Cxcl1P12850 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.69■□□□□ 0.1
Cxcl1P12850 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.69■□□□□ 0.1
Cxcl1P12850 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.69■□□□□ 0.1
Cxcl1P12850 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl1P12850 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.69■□□□□ 0.1
Cxcl1P12850 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cxcl1P12850 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.69■□□□□ 0.1
Cxcl1P12850 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.68■□□□□ 0.1
Cxcl1P12850 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cxcl1P12850 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl1P12850 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl1P12850 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.68■□□□□ 0.1
Cxcl1P12850 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl1P12850 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl1P12850 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl1P12850 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl1P12850 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl1P12850 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl1P12850 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl1P12850 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl1P12850 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cxcl1P12850 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cxcl1P12850 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
Cxcl1P12850 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cxcl1P12850 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.67■□□□□ 0.1
Cxcl1P12850 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.67■□□□□ 0.1
Cxcl1P12850 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.67■□□□□ 0.1
Cxcl1P12850 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cxcl1P12850 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.67■□□□□ 0.1
Cxcl1P12850 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Cxcl1P12850 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.66■□□□□ 0.1
Cxcl1P12850 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Cxcl1P12850 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cxcl1P12850 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.66■□□□□ 0.1
Cxcl1P12850 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl1P12850 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.65■□□□□ 0.1
Cxcl1P12850 Rarb-207ENSMUST00000225921 2756 ntBASIC15.65■□□□□ 0.1
Cxcl1P12850 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.65■□□□□ 0.1
Cxcl1P12850 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.65■□□□□ 0.1
Cxcl1P12850 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl1P12850 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl1P12850 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl1P12850 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cxcl1P12850 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl1P12850 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl1P12850 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl1P12850 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cxcl1P12850 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cxcl1P12850 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.65■□□□□ 0.1
Cxcl1P12850 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cxcl1P12850 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cxcl1P12850 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms