Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.85■□□□□ 0.29
Ccl3P10855 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccl3P10855 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccl3P10855 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccl3P10855 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccl3P10855 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccl3P10855 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccl3P10855 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccl3P10855 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ccl3P10855 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccl3P10855 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccl3P10855 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccl3P10855 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccl3P10855 Gm22325-201ENSMUST00000158904 308 ntBASIC16.84■□□□□ 0.29
Ccl3P10855 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.84■□□□□ 0.29
Ccl3P10855 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccl3P10855 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccl3P10855 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccl3P10855 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccl3P10855 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccl3P10855 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccl3P10855 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccl3P10855 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.83■□□□□ 0.29
Ccl3P10855 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccl3P10855 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccl3P10855 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.83■□□□□ 0.28
Ccl3P10855 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.83■□□□□ 0.28
Ccl3P10855 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccl3P10855 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccl3P10855 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.83■□□□□ 0.28
Ccl3P10855 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ccl3P10855 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.83■□□□□ 0.28
Ccl3P10855 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.83■□□□□ 0.28
Ccl3P10855 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccl3P10855 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccl3P10855 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccl3P10855 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccl3P10855 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccl3P10855 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl3P10855 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl3P10855 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl3P10855 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ccl3P10855 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ccl3P10855 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl3P10855 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl3P10855 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl3P10855 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl3P10855 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl3P10855 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl3P10855 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Ccl3P10855 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ccl3P10855 Gm44549-201ENSMUST00000208351 577 ntBASIC16.82■□□□□ 0.28
Ccl3P10855 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccl3P10855 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl3P10855 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl3P10855 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccl3P10855 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.82■□□□□ 0.28
Ccl3P10855 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccl3P10855 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccl3P10855 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccl3P10855 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccl3P10855 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccl3P10855 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.81■□□□□ 0.28
Ccl3P10855 Gm6576-201ENSMUST00000169678 883 ntBASIC16.81■□□□□ 0.28
Ccl3P10855 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.81■□□□□ 0.28
Ccl3P10855 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccl3P10855 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ccl3P10855 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccl3P10855 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccl3P10855 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.8■□□□□ 0.28
Ccl3P10855 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ccl3P10855 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccl3P10855 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccl3P10855 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccl3P10855 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccl3P10855 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccl3P10855 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccl3P10855 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccl3P10855 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccl3P10855 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccl3P10855 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccl3P10855 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccl3P10855 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Ccl3P10855 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ccl3P10855 Gm11249-201ENSMUST00000117071 859 ntBASIC16.79■□□□□ 0.28
Ccl3P10855 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Ccl3P10855 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.79■□□□□ 0.28
Ccl3P10855 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccl3P10855 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccl3P10855 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccl3P10855 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccl3P10855 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccl3P10855 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.78■□□□□ 0.28
Ccl3P10855 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl3P10855 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl3P10855 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl3P10855 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl3P10855 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl3P10855 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl3P10855 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms