Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim1P0C8K7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.11□□□□□ -0.31
Smim1P0C8K7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Smim1P0C8K7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim1P0C8K7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim1P0C8K7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim1P0C8K7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim1P0C8K7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim1P0C8K7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim1P0C8K7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim1P0C8K7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim1P0C8K7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Smim1P0C8K7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smim1P0C8K7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.1□□□□□ -0.31
Smim1P0C8K7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.1□□□□□ -0.31
Smim1P0C8K7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.1□□□□□ -0.31
Smim1P0C8K7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smim1P0C8K7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.09□□□□□ -0.31
Smim1P0C8K7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim1P0C8K7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smim1P0C8K7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smim1P0C8K7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim1P0C8K7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim1P0C8K7 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.08□□□□□ -0.32
Smim1P0C8K7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Smim1P0C8K7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smim1P0C8K7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim1P0C8K7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim1P0C8K7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Smim1P0C8K7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim1P0C8K7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim1P0C8K7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Smim1P0C8K7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smim1P0C8K7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Smim1P0C8K7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim1P0C8K7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim1P0C8K7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim1P0C8K7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim1P0C8K7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim1P0C8K7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smim1P0C8K7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Smim1P0C8K7 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.07□□□□□ -0.32
Smim1P0C8K7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim1P0C8K7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim1P0C8K7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim1P0C8K7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smim1P0C8K7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smim1P0C8K7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim1P0C8K7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Smim1P0C8K7 Gm6821-201ENSMUST00000107540 542 ntBASIC13.06□□□□□ -0.32
Smim1P0C8K7 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim1P0C8K7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim1P0C8K7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smim1P0C8K7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Smim1P0C8K7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim1P0C8K7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim1P0C8K7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim1P0C8K7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smim1P0C8K7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Smim1P0C8K7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim1P0C8K7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim1P0C8K7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smim1P0C8K7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms