Protein–RNA interactions for Protein: P07744

Krt4, Keratin, type II cytoskeletal 4, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt4P07744 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Krt4P07744 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Krt4P07744 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Krt4P07744 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Krt4P07744 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Krt4P07744 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Krt4P07744 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt4P07744 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Krt4P07744 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Krt4P07744 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.83■□□□□ 0.6
Krt4P07744 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Krt4P07744 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt4P07744 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt4P07744 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt4P07744 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt4P07744 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Krt4P07744 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Krt4P07744 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Krt4P07744 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt4P07744 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Krt4P07744 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Krt4P07744 Gm11421-201ENSMUST00000122124 294 ntBASIC18.82■□□□□ 0.6
Krt4P07744 Smad6-203ENSMUST00000179458 273 ntBASIC18.82■□□□□ 0.6
Krt4P07744 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Krt4P07744 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt4P07744 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt4P07744 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Krt4P07744 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt4P07744 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt4P07744 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Krt4P07744 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt4P07744 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt4P07744 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.81■□□□□ 0.6
Krt4P07744 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.81■□□□□ 0.6
Krt4P07744 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt4P07744 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.81■□□□□ 0.6
Krt4P07744 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt4P07744 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.81■□□□□ 0.6
Krt4P07744 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt4P07744 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Krt4P07744 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt4P07744 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt4P07744 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Krt4P07744 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt4P07744 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Krt4P07744 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Krt4P07744 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt4P07744 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt4P07744 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt4P07744 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt4P07744 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt4P07744 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt4P07744 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt4P07744 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Krt4P07744 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Krt4P07744 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt4P07744 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Krt4P07744 Gm43173-201ENSMUST00000202246 593 ntBASIC18.79■□□□□ 0.6
Krt4P07744 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt4P07744 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt4P07744 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Krt4P07744 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt4P07744 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Krt4P07744 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Krt4P07744 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.79■□□□□ 0.6
Krt4P07744 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt4P07744 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt4P07744 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Krt4P07744 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt4P07744 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt4P07744 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt4P07744 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt4P07744 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.78■□□□□ 0.6
Krt4P07744 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.78■□□□□ 0.6
Krt4P07744 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Krt4P07744 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt4P07744 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt4P07744 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt4P07744 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt4P07744 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Krt4P07744 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt4P07744 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.77■□□□□ 0.6
Krt4P07744 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt4P07744 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt4P07744 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt4P07744 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Krt4P07744 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Krt4P07744 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Krt4P07744 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt4P07744 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Krt4P07744 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.76■□□□□ 0.59
Krt4P07744 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Krt4P07744 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt4P07744 Gm45417-201ENSMUST00000209533 758 ntBASIC18.76■□□□□ 0.59
Krt4P07744 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Krt4P07744 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.76■□□□□ 0.59
Krt4P07744 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Krt4P07744 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Krt4P07744 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Krt4P07744 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms