Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.67■□□□□ 0.9
P01734 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
P01734 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
P01734 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P01734 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
P01734 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.66■□□□□ 0.9
P01734 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P01734 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
P01734 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
P01734 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
P01734 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
P01734 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P01734 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
P01734 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P01734 Gm6420-201ENSMUST00000193885 723 ntBASIC20.65■□□□□ 0.9
P01734 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
P01734 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
P01734 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
P01734 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
P01734 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
P01734 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
P01734 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
P01734 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P01734 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.64■□□□□ 0.89
P01734 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.64■□□□□ 0.89
P01734 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
P01734 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
P01734 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P01734 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
P01734 Nespas-201ENSMUST00000143738 1083 ntBASIC20.63■□□□□ 0.89
P01734 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.63■□□□□ 0.89
P01734 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
P01734 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P01734 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
P01734 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P01734 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
P01734 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P01734 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P01734 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
P01734 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01734 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
P01734 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
P01734 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
P01734 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01734 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01734 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.62■□□□□ 0.89
P01734 Gm29257-201ENSMUST00000186115 639 ntBASIC20.62■□□□□ 0.89
P01734 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P01734 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P01734 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.62■□□□□ 0.89
P01734 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
P01734 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01734 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P01734 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01734 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01734 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01734 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P01734 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.61■□□□□ 0.89
P01734 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01734 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P01734 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P01734 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01734 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
P01734 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
P01734 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01734 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01734 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01734 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.6■□□□□ 0.89
P01734 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01734 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
P01734 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01734 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01734 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01734 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01734 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
P01734 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.6■□□□□ 0.89
P01734 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
P01734 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P01734 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.59■□□□□ 0.89
P01734 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P01734 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
P01734 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
P01734 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
P01734 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
P01734 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.58■□□□□ 0.89
P01734 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
P01734 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
P01734 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
P01734 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
P01734 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
P01734 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
P01734 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
P01734 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
P01734 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
P01734 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P01734 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
P01734 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
P01734 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
P01734 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.57■□□□□ 0.88
P01734 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms