Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vti1aO89116 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vti1aO89116 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vti1aO89116 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vti1aO89116 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Vti1aO89116 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vti1aO89116 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vti1aO89116 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
Vti1aO89116 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Vti1aO89116 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vti1aO89116 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.43■□□□□ 0.86
Vti1aO89116 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vti1aO89116 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vti1aO89116 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vti1aO89116 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vti1aO89116 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.42■□□□□ 0.86
Vti1aO89116 Gm38205-201ENSMUST00000192243 258 ntBASIC20.42■□□□□ 0.86
Vti1aO89116 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.42■□□□□ 0.86
Vti1aO89116 Gm6365-201ENSMUST00000054711 744 ntBASIC20.42■□□□□ 0.86
Vti1aO89116 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vti1aO89116 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vti1aO89116 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vti1aO89116 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.42■□□□□ 0.86
Vti1aO89116 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Vti1aO89116 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vti1aO89116 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.41■□□□□ 0.86
Vti1aO89116 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vti1aO89116 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vti1aO89116 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
Vti1aO89116 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vti1aO89116 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vti1aO89116 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vti1aO89116 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Vti1aO89116 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vti1aO89116 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vti1aO89116 Golph3-202ENSMUST00000226517 2359 ntBASIC20.4■□□□□ 0.86
Vti1aO89116 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vti1aO89116 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vti1aO89116 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vti1aO89116 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Vti1aO89116 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vti1aO89116 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vti1aO89116 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vti1aO89116 Nespas-201ENSMUST00000143738 1083 ntBASIC20.39■□□□□ 0.85
Vti1aO89116 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.39■□□□□ 0.85
Vti1aO89116 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vti1aO89116 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vti1aO89116 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Vti1aO89116 AA386476-201ENSMUST00000098781 1665 ntBASIC20.38■□□□□ 0.85
Vti1aO89116 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vti1aO89116 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vti1aO89116 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.38■□□□□ 0.85
Vti1aO89116 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vti1aO89116 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.38■□□□□ 0.85
Vti1aO89116 Gm6420-201ENSMUST00000193885 723 ntBASIC20.38■□□□□ 0.85
Vti1aO89116 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vti1aO89116 Gm5408-201ENSMUST00000197998 747 ntBASIC20.38■□□□□ 0.85
Vti1aO89116 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.38■□□□□ 0.85
Vti1aO89116 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Vti1aO89116 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vti1aO89116 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vti1aO89116 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vti1aO89116 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vti1aO89116 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.37■□□□□ 0.85
Vti1aO89116 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Vti1aO89116 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.37■□□□□ 0.85
Vti1aO89116 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Vti1aO89116 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.37■□□□□ 0.85
Vti1aO89116 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.37■□□□□ 0.85
Vti1aO89116 Gm4968-201ENSMUST00000071458 858 ntBASIC20.37■□□□□ 0.85
Vti1aO89116 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.37■□□□□ 0.85
Vti1aO89116 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vti1aO89116 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vti1aO89116 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vti1aO89116 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vti1aO89116 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vti1aO89116 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Vti1aO89116 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Vti1aO89116 Gm10653-202ENSMUST00000139570 835 ntBASIC20.36■□□□□ 0.85
Vti1aO89116 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vti1aO89116 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.36■□□□□ 0.85
Vti1aO89116 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vti1aO89116 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vti1aO89116 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vti1aO89116 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vti1aO89116 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vti1aO89116 Gm13146-201ENSMUST00000118508 780 ntBASIC20.35■□□□□ 0.85
Vti1aO89116 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vti1aO89116 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vti1aO89116 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vti1aO89116 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vti1aO89116 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vti1aO89116 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vti1aO89116 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vti1aO89116 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vti1aO89116 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vti1aO89116 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vti1aO89116 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vti1aO89116 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vti1aO89116 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms