Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ClppO88696 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ClppO88696 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ClppO88696 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ClppO88696 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ClppO88696 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ClppO88696 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
ClppO88696 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ClppO88696 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClppO88696 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClppO88696 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClppO88696 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClppO88696 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ClppO88696 Gm10602-201ENSMUST00000098239 609 ntBASIC18.4■□□□□ 0.54
ClppO88696 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.4■□□□□ 0.54
ClppO88696 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ClppO88696 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClppO88696 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
ClppO88696 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.39■□□□□ 0.54
ClppO88696 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ClppO88696 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClppO88696 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClppO88696 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ClppO88696 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClppO88696 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClppO88696 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClppO88696 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.39■□□□□ 0.53
ClppO88696 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClppO88696 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ClppO88696 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClppO88696 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClppO88696 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClppO88696 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClppO88696 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.38■□□□□ 0.53
ClppO88696 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClppO88696 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.38■□□□□ 0.53
ClppO88696 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ClppO88696 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ClppO88696 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.38■□□□□ 0.53
ClppO88696 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClppO88696 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClppO88696 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.37■□□□□ 0.53
ClppO88696 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ClppO88696 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.37■□□□□ 0.53
ClppO88696 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.37■□□□□ 0.53
ClppO88696 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ClppO88696 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ClppO88696 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ClppO88696 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ClppO88696 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ClppO88696 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ClppO88696 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ClppO88696 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.36■□□□□ 0.53
ClppO88696 Gm7514-201ENSMUST00000209475 934 ntBASIC18.36■□□□□ 0.53
ClppO88696 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClppO88696 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClppO88696 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClppO88696 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ClppO88696 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ClppO88696 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClppO88696 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClppO88696 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.35■□□□□ 0.53
ClppO88696 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
ClppO88696 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClppO88696 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.35■□□□□ 0.53
ClppO88696 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClppO88696 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ClppO88696 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.35■□□□□ 0.53
ClppO88696 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ClppO88696 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.35■□□□□ 0.53
ClppO88696 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.35■□□□□ 0.53
ClppO88696 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ClppO88696 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClppO88696 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClppO88696 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ClppO88696 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClppO88696 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ClppO88696 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ClppO88696 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.34■□□□□ 0.53
ClppO88696 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClppO88696 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ClppO88696 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ClppO88696 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ClppO88696 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ClppO88696 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ClppO88696 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms