Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops4O88544 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Cops4O88544 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cops4O88544 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.49■□□□□ 0.39
Cops4O88544 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cops4O88544 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops4O88544 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops4O88544 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.49■□□□□ 0.39
Cops4O88544 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops4O88544 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Cops4O88544 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops4O88544 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops4O88544 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops4O88544 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops4O88544 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops4O88544 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops4O88544 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops4O88544 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.48■□□□□ 0.39
Cops4O88544 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.48■□□□□ 0.39
Cops4O88544 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops4O88544 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops4O88544 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops4O88544 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.48■□□□□ 0.39
Cops4O88544 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.48■□□□□ 0.39
Cops4O88544 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.48■□□□□ 0.39
Cops4O88544 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops4O88544 Gm9959-201ENSMUST00000068277 390 ntBASIC17.48■□□□□ 0.39
Cops4O88544 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops4O88544 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops4O88544 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops4O88544 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.48■□□□□ 0.39
Cops4O88544 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cops4O88544 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops4O88544 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops4O88544 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops4O88544 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops4O88544 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cops4O88544 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.47■□□□□ 0.39
Cops4O88544 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops4O88544 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cops4O88544 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Cops4O88544 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cops4O88544 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Cops4O88544 Gm43530-201ENSMUST00000195920 274 ntBASIC17.47■□□□□ 0.39
Cops4O88544 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.47■□□□□ 0.39
Cops4O88544 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.47■□□□□ 0.39
Cops4O88544 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Cops4O88544 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.47■□□□□ 0.39
Cops4O88544 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops4O88544 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops4O88544 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops4O88544 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops4O88544 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops4O88544 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
Cops4O88544 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cops4O88544 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cops4O88544 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cops4O88544 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cops4O88544 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cops4O88544 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cops4O88544 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cops4O88544 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.46■□□□□ 0.39
Cops4O88544 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.46■□□□□ 0.39
Cops4O88544 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cops4O88544 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.46■□□□□ 0.38
Cops4O88544 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.46■□□□□ 0.38
Cops4O88544 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cops4O88544 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.45■□□□□ 0.38
Cops4O88544 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops4O88544 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops4O88544 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops4O88544 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops4O88544 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Cops4O88544 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops4O88544 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops4O88544 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.45■□□□□ 0.38
Cops4O88544 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops4O88544 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cops4O88544 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.45■□□□□ 0.38
Cops4O88544 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops4O88544 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops4O88544 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops4O88544 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cops4O88544 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cops4O88544 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.44■□□□□ 0.38
Cops4O88544 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cops4O88544 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops4O88544 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops4O88544 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.44■□□□□ 0.38
Cops4O88544 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops4O88544 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cops4O88544 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops4O88544 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.44■□□□□ 0.38
Cops4O88544 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.44■□□□□ 0.38
Cops4O88544 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cops4O88544 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops4O88544 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops4O88544 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cops4O88544 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cops4O88544 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms