Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.67■□□□□ 0.1
SncaO55042 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.67■□□□□ 0.1
SncaO55042 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SncaO55042 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.67■□□□□ 0.1
SncaO55042 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SncaO55042 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SncaO55042 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SncaO55042 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SncaO55042 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SncaO55042 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SncaO55042 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SncaO55042 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SncaO55042 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SncaO55042 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SncaO55042 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SncaO55042 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SncaO55042 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SncaO55042 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SncaO55042 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SncaO55042 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.65■□□□□ 0.1
SncaO55042 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SncaO55042 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SncaO55042 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SncaO55042 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SncaO55042 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SncaO55042 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SncaO55042 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SncaO55042 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SncaO55042 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SncaO55042 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SncaO55042 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.65■□□□□ 0.1
SncaO55042 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.65■□□□□ 0.1
SncaO55042 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SncaO55042 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SncaO55042 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SncaO55042 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SncaO55042 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SncaO55042 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SncaO55042 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SncaO55042 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SncaO55042 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SncaO55042 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SncaO55042 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SncaO55042 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SncaO55042 Golgb1-201ENSMUST00000023534 498 ntBASIC15.64■□□□□ 0.09
SncaO55042 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SncaO55042 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SncaO55042 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SncaO55042 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SncaO55042 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SncaO55042 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.64■□□□□ 0.09
SncaO55042 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
SncaO55042 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SncaO55042 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SncaO55042 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SncaO55042 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SncaO55042 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SncaO55042 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SncaO55042 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SncaO55042 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SncaO55042 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.63■□□□□ 0.09
SncaO55042 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SncaO55042 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SncaO55042 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SncaO55042 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SncaO55042 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SncaO55042 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SncaO55042 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SncaO55042 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SncaO55042 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SncaO55042 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.63■□□□□ 0.09
SncaO55042 Golph3-205ENSMUST00000228671 2842 ntBASIC15.63■□□□□ 0.09
SncaO55042 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.62■□□□□ 0.09
SncaO55042 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SncaO55042 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SncaO55042 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.62■□□□□ 0.09
SncaO55042 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.62■□□□□ 0.09
SncaO55042 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SncaO55042 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.62■□□□□ 0.09
SncaO55042 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SncaO55042 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SncaO55042 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SncaO55042 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SncaO55042 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SncaO55042 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SncaO55042 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SncaO55042 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.61■□□□□ 0.09
SncaO55042 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SncaO55042 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
SncaO55042 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SncaO55042 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.61■□□□□ 0.09
SncaO55042 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SncaO55042 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SncaO55042 Gm12922-201ENSMUST00000120626 809 ntBASIC15.61■□□□□ 0.09
SncaO55042 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SncaO55042 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.61■□□□□ 0.09
SncaO55042 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SncaO55042 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SncaO55042 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.61■□□□□ 0.09
SncaO55042 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms