Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc4O35988 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc4O35988 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc4O35988 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc4O35988 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Sdc4O35988 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc4O35988 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sdc4O35988 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Sdc4O35988 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc4O35988 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc4O35988 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc4O35988 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.53■□□□□ 0.72
Sdc4O35988 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc4O35988 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.53■□□□□ 0.72
Sdc4O35988 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Sdc4O35988 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Sdc4O35988 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc4O35988 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc4O35988 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc4O35988 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sdc4O35988 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
Sdc4O35988 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdc4O35988 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdc4O35988 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdc4O35988 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.52■□□□□ 0.72
Sdc4O35988 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sdc4O35988 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Sdc4O35988 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sdc4O35988 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.52■□□□□ 0.71
Sdc4O35988 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc4O35988 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc4O35988 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc4O35988 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc4O35988 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc4O35988 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Sdc4O35988 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc4O35988 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.51■□□□□ 0.71
Sdc4O35988 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc4O35988 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc4O35988 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc4O35988 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc4O35988 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc4O35988 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc4O35988 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc4O35988 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sdc4O35988 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Sdc4O35988 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc4O35988 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc4O35988 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc4O35988 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc4O35988 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.5■□□□□ 0.71
Sdc4O35988 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc4O35988 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.5■□□□□ 0.71
Sdc4O35988 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc4O35988 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sdc4O35988 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Sdc4O35988 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc4O35988 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc4O35988 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc4O35988 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc4O35988 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc4O35988 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc4O35988 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc4O35988 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc4O35988 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Sdc4O35988 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sdc4O35988 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Sdc4O35988 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Sdc4O35988 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sdc4O35988 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc4O35988 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc4O35988 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc4O35988 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Sdc4O35988 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Sdc4O35988 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.48■□□□□ 0.71
Sdc4O35988 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Sdc4O35988 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.48■□□□□ 0.71
Sdc4O35988 Gm12441-201ENSMUST00000121806 588 ntBASIC19.48■□□□□ 0.71
Sdc4O35988 Gm6211-202ENSMUST00000167849 925 ntBASIC19.48■□□□□ 0.71
Sdc4O35988 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc4O35988 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc4O35988 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc4O35988 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc4O35988 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc4O35988 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc4O35988 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sdc4O35988 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc4O35988 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc4O35988 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.47■□□□□ 0.71
Sdc4O35988 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc4O35988 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.47■□□□□ 0.71
Sdc4O35988 Gm13148-201ENSMUST00000118892 745 ntBASIC19.47■□□□□ 0.71
Sdc4O35988 Gm5408-201ENSMUST00000197998 747 ntBASIC19.47■□□□□ 0.71
Sdc4O35988 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.47■□□□□ 0.71
Sdc4O35988 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.47■□□□□ 0.71
Sdc4O35988 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sdc4O35988 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc4O35988 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc4O35988 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sdc4O35988 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms