Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Scamp3O35609 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scamp3O35609 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Scamp3O35609 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Scamp3O35609 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scamp3O35609 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scamp3O35609 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scamp3O35609 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.84■□□□□ 0.61
Scamp3O35609 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Scamp3O35609 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scamp3O35609 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.84■□□□□ 0.61
Scamp3O35609 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scamp3O35609 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scamp3O35609 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scamp3O35609 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Scamp3O35609 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scamp3O35609 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Scamp3O35609 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Scamp3O35609 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Scamp3O35609 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scamp3O35609 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scamp3O35609 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scamp3O35609 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.83■□□□□ 0.6
Scamp3O35609 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Scamp3O35609 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scamp3O35609 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scamp3O35609 Gm7514-201ENSMUST00000209475 934 ntBASIC18.82■□□□□ 0.6
Scamp3O35609 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scamp3O35609 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scamp3O35609 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scamp3O35609 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.82■□□□□ 0.6
Scamp3O35609 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scamp3O35609 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scamp3O35609 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scamp3O35609 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Scamp3O35609 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Scamp3O35609 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scamp3O35609 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scamp3O35609 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.81■□□□□ 0.6
Scamp3O35609 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.81■□□□□ 0.6
Scamp3O35609 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scamp3O35609 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.81■□□□□ 0.6
Scamp3O35609 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.81■□□□□ 0.6
Scamp3O35609 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.81■□□□□ 0.6
Scamp3O35609 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scamp3O35609 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scamp3O35609 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.81■□□□□ 0.6
Scamp3O35609 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scamp3O35609 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.81■□□□□ 0.6
Scamp3O35609 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
Scamp3O35609 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scamp3O35609 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scamp3O35609 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Scamp3O35609 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Scamp3O35609 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Scamp3O35609 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scamp3O35609 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.8■□□□□ 0.6
Scamp3O35609 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Scamp3O35609 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scamp3O35609 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scamp3O35609 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Scamp3O35609 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scamp3O35609 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Scamp3O35609 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scamp3O35609 Gm7860-201ENSMUST00000121190 879 ntBASIC18.79■□□□□ 0.6
Scamp3O35609 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.79■□□□□ 0.6
Scamp3O35609 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.79■□□□□ 0.6
Scamp3O35609 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.79■□□□□ 0.6
Scamp3O35609 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scamp3O35609 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scamp3O35609 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scamp3O35609 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scamp3O35609 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scamp3O35609 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Scamp3O35609 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Scamp3O35609 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scamp3O35609 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scamp3O35609 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scamp3O35609 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.78■□□□□ 0.6
Scamp3O35609 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.78■□□□□ 0.6
Scamp3O35609 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.78■□□□□ 0.6
Scamp3O35609 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scamp3O35609 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Scamp3O35609 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Scamp3O35609 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scamp3O35609 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scamp3O35609 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scamp3O35609 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.77■□□□□ 0.6
Scamp3O35609 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Scamp3O35609 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scamp3O35609 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scamp3O35609 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scamp3O35609 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scamp3O35609 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scamp3O35609 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scamp3O35609 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Scamp3O35609 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scamp3O35609 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scamp3O35609 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scamp3O35609 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms