Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.69■□□□□ 0.58
Slc1a6O35544 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc1a6O35544 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc1a6O35544 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc1a6O35544 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Slc1a6O35544 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc1a6O35544 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc1a6O35544 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.68■□□□□ 0.58
Slc1a6O35544 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.68■□□□□ 0.58
Slc1a6O35544 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
Slc1a6O35544 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc1a6O35544 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc1a6O35544 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Slc1a6O35544 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc1a6O35544 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Slc1a6O35544 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Slc1a6O35544 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc1a6O35544 Rarb-207ENSMUST00000225921 2756 ntBASIC18.67■□□□□ 0.58
Slc1a6O35544 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc1a6O35544 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc1a6O35544 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc1a6O35544 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.67■□□□□ 0.58
Slc1a6O35544 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Slc1a6O35544 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.67■□□□□ 0.58
Slc1a6O35544 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc1a6O35544 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
Slc1a6O35544 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc1a6O35544 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Slc1a6O35544 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc1a6O35544 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc1a6O35544 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.66■□□□□ 0.58
Slc1a6O35544 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc1a6O35544 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc1a6O35544 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Slc1a6O35544 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Slc1a6O35544 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Slc1a6O35544 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Slc1a6O35544 Gm5812-201ENSMUST00000061073 957 ntBASIC18.65■□□□□ 0.58
Slc1a6O35544 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc1a6O35544 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc1a6O35544 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc1a6O35544 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.65■□□□□ 0.58
Slc1a6O35544 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Slc1a6O35544 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.65■□□□□ 0.58
Slc1a6O35544 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc1a6O35544 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc1a6O35544 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc1a6O35544 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.64■□□□□ 0.57
Slc1a6O35544 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc1a6O35544 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.64■□□□□ 0.57
Slc1a6O35544 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc1a6O35544 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc1a6O35544 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc1a6O35544 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc1a6O35544 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc1a6O35544 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc1a6O35544 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc1a6O35544 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc1a6O35544 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc1a6O35544 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc1a6O35544 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slc1a6O35544 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.63■□□□□ 0.57
Slc1a6O35544 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Slc1a6O35544 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slc1a6O35544 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc1a6O35544 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc1a6O35544 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.63■□□□□ 0.57
Slc1a6O35544 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.63■□□□□ 0.57
Slc1a6O35544 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slc1a6O35544 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc1a6O35544 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc1a6O35544 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc1a6O35544 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Slc1a6O35544 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc1a6O35544 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc1a6O35544 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc1a6O35544 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.62■□□□□ 0.57
Slc1a6O35544 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc1a6O35544 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc1a6O35544 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc1a6O35544 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc1a6O35544 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc1a6O35544 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.62■□□□□ 0.57
Slc1a6O35544 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc1a6O35544 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc1a6O35544 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Slc1a6O35544 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc1a6O35544 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Slc1a6O35544 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc1a6O35544 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc1a6O35544 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.61■□□□□ 0.57
Slc1a6O35544 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc1a6O35544 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc1a6O35544 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc1a6O35544 Gm15546-201ENSMUST00000122095 826 ntBASIC18.61■□□□□ 0.57
Slc1a6O35544 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc1a6O35544 Gm9959-201ENSMUST00000068277 390 ntBASIC18.61■□□□□ 0.57
Slc1a6O35544 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc1a6O35544 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc1a6O35544 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms