Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clk4O35493 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.13■□□□□ 0.49
Clk4O35493 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Clk4O35493 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Clk4O35493 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.13■□□□□ 0.49
Clk4O35493 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk4O35493 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk4O35493 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk4O35493 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk4O35493 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.12■□□□□ 0.49
Clk4O35493 Gm8495-201ENSMUST00000188740 694 ntBASIC18.12■□□□□ 0.49
Clk4O35493 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk4O35493 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clk4O35493 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk4O35493 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.12■□□□□ 0.49
Clk4O35493 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Clk4O35493 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Clk4O35493 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Clk4O35493 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Clk4O35493 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clk4O35493 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.11■□□□□ 0.49
Clk4O35493 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clk4O35493 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Clk4O35493 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Clk4O35493 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Clk4O35493 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clk4O35493 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk4O35493 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk4O35493 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk4O35493 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk4O35493 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk4O35493 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Clk4O35493 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk4O35493 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.1■□□□□ 0.49
Clk4O35493 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.1■□□□□ 0.49
Clk4O35493 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk4O35493 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Clk4O35493 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Clk4O35493 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk4O35493 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk4O35493 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk4O35493 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk4O35493 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.09■□□□□ 0.49
Clk4O35493 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.09■□□□□ 0.49
Clk4O35493 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.09■□□□□ 0.49
Clk4O35493 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk4O35493 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Clk4O35493 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk4O35493 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk4O35493 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk4O35493 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clk4O35493 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clk4O35493 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Clk4O35493 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clk4O35493 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Clk4O35493 Gm5874-201ENSMUST00000096101 508 ntBASIC18.08■□□□□ 0.48
Clk4O35493 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Clk4O35493 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.08■□□□□ 0.48
Clk4O35493 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Clk4O35493 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clk4O35493 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clk4O35493 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk4O35493 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk4O35493 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clk4O35493 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.07■□□□□ 0.48
Clk4O35493 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
Clk4O35493 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clk4O35493 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clk4O35493 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.07■□□□□ 0.48
Clk4O35493 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk4O35493 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.07■□□□□ 0.48
Clk4O35493 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk4O35493 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk4O35493 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk4O35493 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk4O35493 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk4O35493 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clk4O35493 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk4O35493 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk4O35493 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk4O35493 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Clk4O35493 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clk4O35493 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.06■□□□□ 0.48
Clk4O35493 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.06■□□□□ 0.48
Clk4O35493 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.06■□□□□ 0.48
Clk4O35493 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clk4O35493 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clk4O35493 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clk4O35493 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Clk4O35493 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Clk4O35493 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.05■□□□□ 0.48
Clk4O35493 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.05■□□□□ 0.48
Clk4O35493 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clk4O35493 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Clk4O35493 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clk4O35493 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clk4O35493 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.05■□□□□ 0.48
Clk4O35493 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.05■□□□□ 0.48
Clk4O35493 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.05■□□□□ 0.48
Clk4O35493 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms