Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6bO35451 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atf6bO35451 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.4■□□□□ 0.22
Atf6bO35451 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6bO35451 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.4■□□□□ 0.22
Atf6bO35451 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6bO35451 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6bO35451 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.4■□□□□ 0.22
Atf6bO35451 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6bO35451 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6bO35451 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6bO35451 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6bO35451 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6bO35451 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atf6bO35451 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6bO35451 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6bO35451 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Atf6bO35451 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6bO35451 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.39■□□□□ 0.21
Atf6bO35451 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Atf6bO35451 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Atf6bO35451 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Atf6bO35451 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6bO35451 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.39■□□□□ 0.21
Atf6bO35451 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6bO35451 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6bO35451 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atf6bO35451 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6bO35451 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6bO35451 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6bO35451 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.38■□□□□ 0.21
Atf6bO35451 Gm5874-201ENSMUST00000096101 508 ntBASIC16.38■□□□□ 0.21
Atf6bO35451 Gm10493-201ENSMUST00000097270 612 ntBASIC16.38■□□□□ 0.21
Atf6bO35451 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Atf6bO35451 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.38■□□□□ 0.21
Atf6bO35451 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6bO35451 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6bO35451 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6bO35451 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atf6bO35451 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6bO35451 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6bO35451 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Atf6bO35451 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6bO35451 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.37■□□□□ 0.21
Atf6bO35451 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6bO35451 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Atf6bO35451 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.37■□□□□ 0.21
Atf6bO35451 Gm8495-201ENSMUST00000188740 694 ntBASIC16.37■□□□□ 0.21
Atf6bO35451 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.37■□□□□ 0.21
Atf6bO35451 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6bO35451 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6bO35451 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.37■□□□□ 0.21
Atf6bO35451 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Atf6bO35451 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6bO35451 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Atf6bO35451 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.37■□□□□ 0.21
Atf6bO35451 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Atf6bO35451 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6bO35451 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6bO35451 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Atf6bO35451 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6bO35451 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.36■□□□□ 0.21
Atf6bO35451 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6bO35451 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6bO35451 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6bO35451 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.36■□□□□ 0.21
Atf6bO35451 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Atf6bO35451 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6bO35451 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Atf6bO35451 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6bO35451 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6bO35451 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Atf6bO35451 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6bO35451 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6bO35451 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6bO35451 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6bO35451 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6bO35451 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Atf6bO35451 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.35■□□□□ 0.21
Atf6bO35451 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.35■□□□□ 0.21
Atf6bO35451 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.35■□□□□ 0.21
Atf6bO35451 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6bO35451 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6bO35451 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Atf6bO35451 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.35■□□□□ 0.21
Atf6bO35451 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6bO35451 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6bO35451 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Atf6bO35451 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Atf6bO35451 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6bO35451 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6bO35451 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.34■□□□□ 0.21
Atf6bO35451 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6bO35451 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6bO35451 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6bO35451 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6bO35451 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6bO35451 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Atf6bO35451 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.34■□□□□ 0.21
Atf6bO35451 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms