Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Tnfrsf11aO35305 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Tnfrsf11aO35305 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11aO35305 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf11aO35305 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.5■□□□□ 0.87
Tnfrsf11aO35305 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.5■□□□□ 0.87
Tnfrsf11aO35305 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tnfrsf11aO35305 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11aO35305 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11aO35305 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11aO35305 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11aO35305 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.5■□□□□ 0.87
Tnfrsf11aO35305 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11aO35305 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11aO35305 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11aO35305 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11aO35305 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf11aO35305 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tnfrsf11aO35305 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11aO35305 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11aO35305 Gm13234-201ENSMUST00000120010 747 ntBASIC20.49■□□□□ 0.87
Tnfrsf11aO35305 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11aO35305 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.49■□□□□ 0.87
Tnfrsf11aO35305 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11aO35305 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11aO35305 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11aO35305 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11aO35305 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Tnfrsf11aO35305 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf11aO35305 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf11aO35305 Gm13146-201ENSMUST00000118508 780 ntBASIC20.48■□□□□ 0.87
Tnfrsf11aO35305 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf11aO35305 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf11aO35305 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.48■□□□□ 0.87
Tnfrsf11aO35305 Gm10033-202ENSMUST00000211874 928 ntBASIC20.48■□□□□ 0.87
Tnfrsf11aO35305 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf11aO35305 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf11aO35305 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf11aO35305 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf11aO35305 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.48■□□□□ 0.87
Tnfrsf11aO35305 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf11aO35305 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf11aO35305 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf11aO35305 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.47■□□□□ 0.87
Tnfrsf11aO35305 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf11aO35305 Gm26571-201ENSMUST00000181399 666 ntBASIC20.47■□□□□ 0.87
Tnfrsf11aO35305 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf11aO35305 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf11aO35305 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf11aO35305 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 Gm42642-201ENSMUST00000200683 355 ntBASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 BC021767-201ENSMUST00000126387 1716 ntBASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Tnfrsf11aO35305 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf11aO35305 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf11aO35305 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf11aO35305 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Tnfrsf11aO35305 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf11aO35305 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Tnfrsf11aO35305 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.45■□□□□ 0.86
Tnfrsf11aO35305 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf11aO35305 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf11aO35305 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf11aO35305 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf11aO35305 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Tnfrsf11aO35305 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf11aO35305 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Tnfrsf11aO35305 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Gm8495-201ENSMUST00000188740 694 ntBASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11aO35305 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11aO35305 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11aO35305 Gm42778-201ENSMUST00000199644 553 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms