Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a6B1AVK5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a6B1AVK5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a6B1AVK5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Col4a6B1AVK5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Col4a6B1AVK5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a6B1AVK5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a6B1AVK5 Mir1199-201ENSMUST00000117015 119 ntBASIC19.84■□□□□ 0.77
Col4a6B1AVK5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Col4a6B1AVK5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col4a6B1AVK5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Col4a6B1AVK5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Col4a6B1AVK5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.83■□□□□ 0.77
Col4a6B1AVK5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a6B1AVK5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a6B1AVK5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.83■□□□□ 0.77
Col4a6B1AVK5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Col4a6B1AVK5 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.83■□□□□ 0.76
Col4a6B1AVK5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.83■□□□□ 0.76
Col4a6B1AVK5 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.83■□□□□ 0.76
Col4a6B1AVK5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Col4a6B1AVK5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a6B1AVK5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a6B1AVK5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col4a6B1AVK5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a6B1AVK5 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.82■□□□□ 0.76
Col4a6B1AVK5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a6B1AVK5 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.82■□□□□ 0.76
Col4a6B1AVK5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a6B1AVK5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col4a6B1AVK5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Gm11643-201ENSMUST00000119578 864 ntBASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Col4a6B1AVK5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a6B1AVK5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a6B1AVK5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Col4a6B1AVK5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.8■□□□□ 0.76
Col4a6B1AVK5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a6B1AVK5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a6B1AVK5 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a6B1AVK5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col4a6B1AVK5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a6B1AVK5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a6B1AVK5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a6B1AVK5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a6B1AVK5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Col4a6B1AVK5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a6B1AVK5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a6B1AVK5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a6B1AVK5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col4a6B1AVK5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a6B1AVK5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a6B1AVK5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Col4a6B1AVK5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a6B1AVK5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.78■□□□□ 0.76
Col4a6B1AVK5 Gm13158-201ENSMUST00000122007 736 ntBASIC19.78■□□□□ 0.76
Col4a6B1AVK5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.78■□□□□ 0.76
Col4a6B1AVK5 Mir5122-201ENSMUST00000175004 89 ntBASIC19.78■□□□□ 0.76
Col4a6B1AVK5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.78■□□□□ 0.76
Col4a6B1AVK5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a6B1AVK5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col4a6B1AVK5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a6B1AVK5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a6B1AVK5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Col4a6B1AVK5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.77■□□□□ 0.76
Col4a6B1AVK5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a6B1AVK5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.77■□□□□ 0.76
Col4a6B1AVK5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.77■□□□□ 0.76
Col4a6B1AVK5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a6B1AVK5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col4a6B1AVK5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a6B1AVK5 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a6B1AVK5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a6B1AVK5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a6B1AVK5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col4a6B1AVK5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a6B1AVK5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a6B1AVK5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a6B1AVK5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a6B1AVK5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.75■□□□□ 0.75
Col4a6B1AVK5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.75■□□□□ 0.75
Col4a6B1AVK5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.75■□□□□ 0.75
Col4a6B1AVK5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a6B1AVK5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a6B1AVK5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.75■□□□□ 0.75
Col4a6B1AVK5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.75■□□□□ 0.75
Col4a6B1AVK5 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.75■□□□□ 0.75
Col4a6B1AVK5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms