Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12d-1A0N8R0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Gm9959-201ENSMUST00000068277 390 ntBASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12d-1A0N8R0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-1A0N8R0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-1A0N8R0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav12d-1A0N8R0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-1A0N8R0 Grk6-206ENSMUST00000224995 2971 ntBASIC15.23■□□□□ 0.03
Trav12d-1A0N8R0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-1A0N8R0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-1A0N8R0 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.23■□□□□ 0.03
Trav12d-1A0N8R0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-1A0N8R0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-1A0N8R0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-1A0N8R0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12d-1A0N8R0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav12d-1A0N8R0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12d-1A0N8R0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12d-1A0N8R0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav12d-1A0N8R0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav12d-1A0N8R0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav12d-1A0N8R0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav12d-1A0N8R0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav12d-1A0N8R0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms